Detailed information    

insolico Bioinformatically predicted

Overview

Name   spo0J   Type   Regulator
Locus tag   NW957_RS01565 Genome accession   NZ_CP102977
Coordinates   354103..354948 (+) Length   281 a.a.
NCBI ID   WP_001813832.1    Uniprot ID   -
Organism   Staphylococcus aureus strain 27-G-H     
Function   require for competence development (predicted from homology)   
Competence regulation

Genomic Context

Location: 349103..359948
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  NW957_RS01550 (NW957_01550) - 349371..351212 (-) 1842 WP_000077316.1 bifunctional homocysteine S-methyltransferase/methylenetetrahydrofolate reductase -
  NW957_RS01555 (NW957_01555) metC 351181..352341 (-) 1161 WP_000175846.1 cystathionine beta-lyase MetC -
  NW957_RS01560 (NW957_01560) - 352338..353441 (-) 1104 WP_000655702.1 PLP-dependent transferase -
  NW957_RS01565 (NW957_01565) spo0J 354103..354948 (+) 846 WP_001813832.1 ParB/RepB/Spo0J family partition protein Regulator
  NW957_RS01570 (NW957_01570) - 355105..355986 (+) 882 WP_001077602.1 mechanosensitive ion channel family protein -
  NW957_RS01575 (NW957_01575) - 356016..356219 (+) 204 WP_000157345.1 DUF951 domain-containing protein -
  NW957_RS01580 (NW957_01580) ychF 356231..357328 (+) 1098 WP_001218732.1 redox-regulated ATPase YchF -
  NW957_RS01585 (NW957_01585) - 357414..357605 (-) 192 WP_001052483.1 hypothetical protein -
  NW957_RS01590 (NW957_01590) rpsF 357849..358145 (+) 297 WP_001261460.1 30S ribosomal protein S6 -
  NW957_RS01595 (NW957_01595) ssbA 358166..358669 (+) 504 WP_000934799.1 single-stranded DNA-binding protein Machinery gene
  NW957_RS01600 (NW957_01600) rpsR 358721..358963 (+) 243 WP_000897044.1 30S ribosomal protein S18 -

Sequence

Protein


Download         Length: 281 a.a.        Molecular weight: 32851.85 Da        Isoelectric Point: 10.0091

>NTDB_id=620734 NW957_RS01565 WP_001813832.1 354103..354948(+) (spo0J) [Staphylococcus aureus strain 27-G-H]
MSELSKSEDQRITKTKDEQIKQIDISDIKPNPYQPRKTFDENHLNDLADSIKQYGILQPIVLRKTVQGYYIVVGERRFRA
SKIAGLKYVSAIIKDLTDEDMMELAVIENLQREDLNAIEEAESYQRLITDLKITQQEVAKRLSKSRPYIANMLRLLHLPK
KIADMVKDGRLTSAHGRTLLAIKDEQQMLRLAKRVVKEKWSVRYLENHVNELKNVSSKSETDKVDITKPKFIKQQERQLR
EQYGTKVDISIKKSVGKISFEFDSQEDFLRIIEQLNRRYGK

Nucleotide


Download         Length: 846 bp        

>NTDB_id=620734 NW957_RS01565 WP_001813832.1 354103..354948(+) (spo0J) [Staphylococcus aureus strain 27-G-H]
GTGAGTGAATTGTCAAAAAGTGAAGATCAACGTATTACTAAAACAAAAGATGAACAAATTAAGCAAATAGATATATCGGA
TATCAAACCGAATCCGTATCAGCCCCGAAAAACTTTCGATGAAAATCATTTAAATGATTTGGCAGATTCAATTAAGCAAT
ATGGTATTTTGCAACCAATTGTGCTTAGAAAAACAGTTCAAGGTTATTACATTGTAGTTGGTGAAAGAAGGTTTAGAGCT
TCGAAAATTGCTGGTCTAAAATACGTATCAGCGATTATCAAAGATTTAACAGATGAAGATATGATGGAACTGGCGGTCAT
CGAAAATTTACAACGAGAAGACTTAAATGCGATTGAAGAAGCTGAAAGTTATCAACGTTTGATAACAGATTTGAAAATTA
CACAACAAGAAGTAGCGAAACGATTGAGTAAGTCGCGCCCGTATATAGCGAATATGTTGAGGTTATTACATTTGCCGAAA
AAGATTGCTGACATGGTAAAAGATGGGCGACTGACAAGTGCACATGGACGAACGTTATTGGCAATTAAAGATGAACAACA
AATGCTTAGGTTAGCGAAACGGGTTGTTAAAGAAAAGTGGAGTGTCAGATATTTAGAAAACCATGTTAATGAATTAAAAA
ATGTTTCGTCAAAGTCGGAAACAGACAAAGTAGATATAACTAAGCCTAAATTTATAAAGCAGCAAGAACGACAGTTGCGA
GAACAGTATGGTACCAAAGTAGATATATCAATAAAAAAATCGGTTGGTAAAATCTCATTTGAGTTTGATTCACAAGAAGA
TTTTCTAAGAATAATTGAACAATTAAATCGTAGGTATGGTAAATAG

Domains

Predicted by InterProScan.

HTH domain found in ParB protein (HTH_ParB)

(161-210)

ParB/Sulfiredoxin domain (ParB_N)

(22-109)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  spo0J Streptococcus mutans UA159

41.762

92.883

0.388