Detailed information    

insolico Bioinformatically predicted

Overview

Name   recX   Type   Regulator
Locus tag   NW953_RS09500 Genome accession   NZ_CP102975
Coordinates   1951127..1951945 (-) Length   272 a.a.
NCBI ID   WP_001124422.1    Uniprot ID   P66002
Organism   Staphylococcus aureus strain 16CS0209     
Function   repressor of recA (predicted from homology)   
Homologous recombination

Genomic Context

Location: 1946127..1956945
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  NW953_RS09480 (NW953_09480) - 1947220..1948197 (+) 978 WP_258409261.1 metal-dependent hydrolase -
  NW953_RS09485 (NW953_09485) - 1948458..1949294 (-) 837 WP_258409262.1 hypothetical protein -
  NW953_RS09490 (NW953_09490) - 1949303..1950820 (-) 1518 WP_000535846.1 ABC transporter ATP-binding protein -
  NW953_RS09495 (NW953_09495) - 1950835..1951149 (-) 315 WP_070005047.1 YfhH family protein -
  NW953_RS09500 (NW953_09500) recX 1951127..1951945 (-) 819 WP_001124422.1 recombination regulator RecX Regulator
  NW953_RS09505 (NW953_09505) sgtB 1952206..1953015 (-) 810 WP_000830380.1 monofunctional peptidoglycan glycosyltransferase SgtB -
  NW953_RS09510 (NW953_09510) - 1953355..1953870 (-) 516 WP_000163281.1 type 1 glutamine amidotransferase domain-containing protein -
  NW953_RS09515 (NW953_09515) - 1954000..1954161 (-) 162 WP_001005407.1 SE1561 family protein -
  NW953_RS09520 (NW953_09520) yfkAB 1954385..1955536 (+) 1152 WP_258410000.1 radical SAM/CxCxxxxC motif protein YfkAB -
  NW953_RS09525 (NW953_09525) - 1955796..1956326 (-) 531 WP_000184383.1 acyl-CoA thioesterase -

Sequence

Protein


Download         Length: 272 a.a.        Molecular weight: 32259.10 Da        Isoelectric Point: 5.9211

>NTDB_id=620715 NW953_RS09500 WP_001124422.1 1951127..1951945(-) (recX) [Staphylococcus aureus strain 16CS0209]
MPKITKIEVQKKNKERFNLFLDEQFEMGIDIDTLVKFNLKKGQQLEAADMAEIQKYDHYRIGLNKAIQYLSYKKRTEKEV
IQYLQKEEISEQAISEVIEYCYREKLIDHQDYAESLKNTMIRTTDKGPKIYQQKLYQLGIEPNIIEMFTELYREQQELDD
IIQIAEKISKTKKGPQNKVKEKVMQSLIQKGFEMETIHAVLNEMDFTQDEAVLDDLLQRDLEKIYNKNRKKYTQQKLISK
TIEGLMRKGYKYDKIKAKLEESGIADGTEEIE

Nucleotide


Download         Length: 819 bp        

>NTDB_id=620715 NW953_RS09500 WP_001124422.1 1951127..1951945(-) (recX) [Staphylococcus aureus strain 16CS0209]
GTGCCGAAGATTACTAAAATAGAAGTTCAAAAGAAAAACAAAGAACGGTTTAATCTTTTTTTAGACGAACAATTTGAAAT
GGGTATAGATATTGATACATTAGTCAAATTTAATTTAAAAAAAGGGCAACAACTTGAAGCTGCTGACATGGCAGAGATTC
AAAAGTATGATCATTATCGCATAGGTTTAAATAAAGCAATCCAATATTTATCATATAAAAAGAGAACTGAAAAAGAAGTT
ATACAATATTTACAAAAAGAAGAGATATCAGAGCAAGCGATTTCTGAAGTGATTGAATATTGTTATCGCGAAAAGTTAAT
CGACCATCAAGATTATGCGGAAAGTTTAAAAAATACAATGATTCGCACGACAGATAAAGGACCTAAAATTTATCAACAAA
AACTATATCAACTTGGTATAGAACCAAATATCATTGAAATGTTTACAGAACTTTATAGAGAACAACAGGAACTTGATGAT
ATTATCCAAATTGCTGAAAAAATATCTAAAACAAAAAAGGGGCCACAAAATAAGGTTAAAGAAAAAGTAATGCAATCTTT
AATTCAAAAAGGGTTTGAAATGGAAACCATTCATGCTGTATTGAATGAAATGGATTTTACACAAGATGAAGCGGTTTTAG
ACGATTTATTACAACGAGATTTAGAAAAAATTTATAATAAAAATCGAAAGAAGTACACGCAACAAAAATTAATTTCAAAA
ACTATCGAAGGCCTTATGAGAAAAGGATATAAATATGATAAAATTAAAGCTAAATTAGAAGAAAGTGGTATTGCCGATGG
AACAGAAGAAATTGAGTGA

Domains

Predicted by InterProScan.

RecX family (RecX_HTH2)

(84-203)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB P66002

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  recX Staphylococcus aureus strain ATCC 12600

99.632

100

0.996