Detailed information    

insolico Bioinformatically predicted

Overview

Name   dinR/lexA   Type   Regulator
Locus tag   NW953_RS06465 Genome accession   NZ_CP102975
Coordinates   1333672..1334295 (-) Length   207 a.a.
NCBI ID   WP_001208755.1    Uniprot ID   P65819
Organism   Staphylococcus aureus strain 16CS0209     
Function   repressor of recA; repressor of dinR (predicted from homology)   
Homologous recombination

Genomic Context

Location: 1328672..1339295
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  NW953_RS06440 (NW953_06440) rpmG 1330248..1330397 (+) 150 WP_001265708.1 50S ribosomal protein L33 -
  NW953_RS06445 (NW953_06445) rpsN 1330851..1331120 (+) 270 WP_258409947.1 30S ribosomal protein S14 -
  NW953_RS06450 (NW953_06450) guaC 1331277..1332254 (+) 978 WP_000688126.1 GMP reductase -
  NW953_RS06460 (NW953_06460) - 1332276..1333292 (+) 1017 WP_180991598.1 CAP domain-containing protein -
  NW953_RS06465 (NW953_06465) dinR/lexA 1333672..1334295 (-) 624 WP_001208755.1 transcriptional repressor LexA Regulator
  NW953_RS06470 (NW953_06470) sosA 1334438..1334671 (+) 234 WP_258409948.1 DNA damage-induced cell division inhibitor SosA -
  NW953_RS06475 (NW953_06475) - 1334807..1335046 (+) 240 WP_000071351.1 DUF896 domain-containing protein -
  NW953_RS06480 (NW953_06480) recP/tkt 1335167..1337155 (+) 1989 WP_258409949.1 transketolase Machinery gene
  NW953_RS06485 (NW953_06485) - 1337433..1337675 (+) 243 WP_000246909.1 YneF family protein -
  NW953_RS06490 (NW953_06490) - 1337662..1337760 (+) 99 WP_258409950.1 hypothetical protein -
  NW953_RS06495 (NW953_06495) - 1337854..1338321 (+) 468 WP_000966146.1 CcdC family protein -

Sequence

Protein


Download         Length: 207 a.a.        Molecular weight: 23331.55 Da        Isoelectric Point: 4.8811

>NTDB_id=620684 NW953_RS06465 WP_001208755.1 1333672..1334295(-) (dinR/lexA) [Staphylococcus aureus strain 16CS0209]
MRELTKRQSEIYNYIKQVVQMKGYPPSVREIGEAVGLASSSTVHGHLSRLEEKGYIRRDPTKPRAIEIVSDQTNDNINME
ETIHVPVIGKVTAGVPITAVENIEEYFPLPEHLTSTHNSDIFILNVVGDSMIEAGILDGDKVIVRSQTIAENGDIIVAMT
EEDEATVKRFYKEKNRYRLQPENSTMEPIYLDNVAVIGKVIGLYREM

Nucleotide


Download         Length: 624 bp        

>NTDB_id=620684 NW953_RS06465 WP_001208755.1 1333672..1334295(-) (dinR/lexA) [Staphylococcus aureus strain 16CS0209]
ATGAGAGAATTAACAAAACGACAAAGCGAAATATATAACTATATTAAACAAGTTGTTCAAATGAAAGGTTATCCGCCTAG
TGTTCGCGAAATTGGTGAAGCAGTTGGCTTAGCATCCAGTTCAACTGTTCATGGTCACCTTTCACGTCTTGAAGAAAAAG
GCTATATAAGAAGAGATCCAACGAAACCACGTGCTATAGAAATTGTAAGTGATCAAACAAATGATAATATTAATATGGAA
GAAACGATTCATGTGCCAGTTATTGGTAAAGTCACAGCAGGTGTTCCTATTACCGCAGTAGAAAATATTGAAGAATATTT
TCCATTACCTGAACACTTAACATCGACACACAATAGCGACATATTCATATTAAACGTCGTAGGCGACAGTATGATTGAGG
CTGGTATATTAGACGGAGACAAAGTAATTGTTCGCAGTCAAACCATAGCAGAAAATGGAGACATTATTGTTGCTATGACT
GAGGAAGATGAAGCAACTGTCAAACGCTTCTATAAAGAAAAAAATCGTTATCGATTACAACCTGAAAATAGTACAATGGA
GCCAATATACCTCGACAATGTTGCTGTAATTGGGAAAGTAATTGGTTTGTACCGCGAAATGTAA

Domains

Predicted by InterProScan.

LexA DNA binding domain (LexA_DNA_bind)

(1-65)

Peptidase S24-like (Peptidase_S24)

(86-201)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB P65819

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  dinR/lexA Bacillus subtilis subsp. subtilis str. 168

66.341

99.034

0.657