Detailed information    

insolico Bioinformatically predicted

Overview

Name   ceuB   Type   Machinery gene
Locus tag   NW945_RS03570 Genome accession   NZ_CP102974
Coordinates   751181..752152 (+) Length   323 a.a.
NCBI ID   WP_000876318.1    Uniprot ID   A0A0H2XIG1
Organism   Staphylococcus aureus strain 01-RR-86     
Function   DNA uptake (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 746181..757152
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  NW945_RS03545 (NW945_03545) nrdF 747295..748266 (+) 972 WP_000562498.1 class 1b ribonucleoside-diphosphate reductase subunit beta -
  NW945_RS03550 (NW945_03550) - 748782..748856 (+) 75 Protein_687 hypothetical protein -
  NW945_RS03555 (NW945_03555) istB 748904..749665 (-) 762 WP_001066123.1 IS21-like element helper ATPase IstB -
  NW945_RS03560 (NW945_03560) istA 749658..750950 (-) 1293 WP_029550026.1 IS21 family transposase -
  NW945_RS03565 (NW945_03565) - 751026..751142 (+) 117 Protein_690 hypothetical protein -
  NW945_RS03570 (NW945_03570) ceuB 751181..752152 (+) 972 WP_000876318.1 ABC transporter permease Machinery gene
  NW945_RS03575 (NW945_03575) - 752139..753095 (+) 957 WP_001245577.1 iron chelate uptake ABC transporter family permease subunit -
  NW945_RS03580 (NW945_03580) - 753092..753853 (+) 762 WP_000616840.1 ABC transporter ATP-binding protein -
  NW945_RS03585 (NW945_03585) - 753972..755000 (+) 1029 WP_000754443.1 siderophore ABC transporter substrate-binding protein -
  NW945_RS03590 (NW945_03590) - 755317..755631 (-) 315 WP_258411033.1 CHY zinc finger protein -
  NW945_RS03595 (NW945_03595) murB 755649..756572 (-) 924 WP_000608435.1 UDP-N-acetylmuramate dehydrogenase -

Sequence

Protein


Download         Length: 323 a.a.        Molecular weight: 35582.13 Da        Isoelectric Point: 10.1194

>NTDB_id=620569 NW945_RS03570 WP_000876318.1 751181..752152(+) (ceuB) [Staphylococcus aureus strain 01-RR-86]
MKYLLKGNILLLLLILLTIISLFIGVSELSIKDLLHLTESQRNILFSSRIPRTMSILIAGSSLALAGLIMQQMMQNKFVS
PTTAGTMEWAKLGILIALLFFPTGHILLKLVFAVICSICGTFLFVKIIDFIKVKDVIFVPLLGIMMGGIVASFTTFISLR
TNAVQSIGNWLNGNFAIITSGRYEILYLSIPLLALTYLFANHFTIVGMGKDFTNNLGLSYEKLINIALFITATITALVVV
TVGTLPFLGLVIPNIISIYRGDHLKNAIPHTMMLGAIFVLFSDIVGRIVVYPYEINIGLTIGVFGTIIFLILLMKGRKNY
AQQ

Nucleotide


Download         Length: 972 bp        

>NTDB_id=620569 NW945_RS03570 WP_000876318.1 751181..752152(+) (ceuB) [Staphylococcus aureus strain 01-RR-86]
ATGAAGTATTTATTAAAGGGAAATATTTTGCTTCTATTACTAATATTGTTGACAATTATTTCGTTGTTCATAGGTGTGAG
TGAACTATCAATTAAAGATTTACTACATTTAACTGAGTCACAGCGGAATATTTTATTCTCAAGCCGAATACCAAGGACGA
TGAGTATTTTAATTGCTGGAAGTTCGTTGGCTTTAGCAGGCTTGATAATGCAACAAATGATGCAAAATAAGTTTGTTAGT
CCGACTACAGCTGGAACGATGGAATGGGCTAAACTAGGTATTTTAATTGCTTTATTGTTCTTTCCAACCGGTCATATTTT
ATTAAAACTAGTATTTGCTGTTATTTGCAGTATTTGCGGTACGTTTTTATTTGTTAAAATCATTGATTTTATAAAAGTGA
AAGATGTCATTTTTGTACCGCTTTTAGGAATTATGATGGGTGGGATTGTTGCAAGTTTCACAACCTTCATCTCATTGCGC
ACGAATGCTGTTCAAAGCATTGGTAACTGGCTTAACGGGAACTTTGCCATTATCACAAGTGGACGCTATGAAATTTTATA
TTTAAGTATTCCTCTTTTAGCATTGACATATCTTTTTGCTAATCATTTCACGATTGTAGGAATGGGTAAAGACTTTACTA
ATAATTTAGGTTTGAGTTACGAAAAATTAATTAACATCGCATTGTTTATTACTGCAACTATTACAGCATTGGTAGTGGTG
ACTGTTGGAACATTACCGTTCTTAGGACTAGTAATACCAAATATTATTTCAATTTATCGAGGTGATCATTTGAAAAATGC
TATCCCTCATACGATGATGTTAGGTGCCATCTTTGTATTATTTTCTGATATAGTTGGCAGAATTGTTGTTTATCCATATG
AAATAAATATTGGTTTAACAATAGGTGTATTTGGAACAATCATTTTCCTTATCTTGCTTATGAAAGGTAGGAAAAATTAT
GCGCAACAATAA

Domains

Predicted by InterProScan.

FecCD transport family (FecCD)

(13-315)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A0H2XIG1

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  ceuB Campylobacter jejuni subsp. jejuni 81-176

47.5

99.071

0.471