Detailed information    

insolico Bioinformatically predicted

Overview

Name   vicX   Type   Regulator
Locus tag   NW945_RS00120 Genome accession   NZ_CP102974
Coordinates   29975..30775 (+) Length   266 a.a.
NCBI ID   WP_000088649.1    Uniprot ID   A0A7U7JRT9
Organism   Staphylococcus aureus strain 01-RR-86     
Function   require for competence development (predicted from homology)   
Competence regulation

Genomic Context

Location: 24975..35775
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  NW945_RS00105 (NW945_00105) walK 25644..27470 (+) 1827 WP_000871607.1 cell wall metabolism sensor histidine kinase WalK -
  NW945_RS00110 (NW945_00110) yycH 27463..28797 (+) 1335 WP_001060150.1 two-component system activity regulator YycH -
  NW945_RS00115 (NW945_00115) yycI 28798..29586 (+) 789 WP_001104167.1 two-component system regulatory protein YycI -
  NW945_RS00120 (NW945_00120) vicX 29975..30775 (+) 801 WP_000088649.1 MBL fold metallo-hydrolase Regulator
  NW945_RS00125 (NW945_00125) adsA 31003..33321 (+) 2319 WP_258414401.1 LPXTG-anchored adenosine synthase AdsA -
  NW945_RS00130 (NW945_00130) rlmH 33688..34167 (+) 480 WP_000704777.1 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH -
  NW945_RS00135 (NW945_00135) - 34372..34506 (-) 135 WP_258414402.1 hypothetical protein -
  NW945_RS00140 (NW945_00140) - 34470..34562 (+) 93 WP_001790000.1 hypothetical protein -

Sequence

Protein


Download         Length: 266 a.a.        Molecular weight: 30313.52 Da        Isoelectric Point: 6.3392

>NTDB_id=620557 NW945_RS00120 WP_000088649.1 29975..30775(+) (vicX) [Staphylococcus aureus strain 01-RR-86]
MSRLIRMSVLASGSTGNATFVENEKGSLLVDVGLTGKKMEELFSQIDRNIQDLNGILVTHEHIDHIKGLGVLARKYQLPI
YANEKTWQAIEKKDSRIPMDQKFIFNPYETKSIAGFDVESFNVSHDAIDPQFYIFHNNYKKFTILTDTGYVSDRMKGMIR
GSDAFIFESNHDVDMLRMCRYPWKTKQRILGDMGHVSNEDAGHAMTDVITGNTKRIYLSHLSQDNNMKDLARMSVGQVLN
EHDIDTEKEVLLCDTDKAIPTPIYTI

Nucleotide


Download         Length: 801 bp        

>NTDB_id=620557 NW945_RS00120 WP_000088649.1 29975..30775(+) (vicX) [Staphylococcus aureus strain 01-RR-86]
ATGAGCCGCTTGATACGCATGAGTGTATTAGCAAGTGGTAGTACAGGTAACGCCACTTTTGTAGAAAATGAAAAAGGTAG
TCTATTAGTTGATGTTGGTTTGACTGGCAAGAAAATGGAAGAATTGTTTAGTCAAATTGACCGTAATATTCAAGATTTAA
ATGGTATTTTAGTAACCCATGAACATATTGACCATATTAAAGGTTTAGGTGTTTTAGCGCGTAAATATCAATTGCCAATT
TATGCGAATGAAAAGACTTGGCAAGCTATTGAAAAGAAAGATAGTCGCATCCCTATGGATCAGAAATTCATTTTTAATCC
TTATGAAACGAAATCTATTGCAGGTTTCGATGTTGAATCGTTTAACGTGTCACATGATGCGATAGATCCGCAATTTTATA
TTTTCCATAATAACTATAAGAAGTTTACGATTTTAACGGATACGGGATATGTGTCGGATCGTATGAAAGGTATGATACGT
GGCAGCGATGCGTTTATTTTTGAGAGTAATCATGACGTCGATATGTTGAGAATGTGTCGTTATCCATGGAAGACGAAACA
ACGTATTTTAGGCGATATGGGACATGTATCTAATGAGGATGCGGGCCATGCGATGACGGATGTGATTACAGGCAACACGA
AACGTATTTACCTATCACATTTATCACAAGATAATAATATGAAAGATTTGGCGCGTATGAGTGTTGGTCAAGTATTGAAC
GAACACGATATTGATACGGAAAAAGAAGTATTGCTATGTGATACGGATAAAGCTATTCCAACGCCAATATATACAATATA
A

Domains

Predicted by InterProScan.

Metallo-beta-lactamase superfamily (Lactamase_B)

(14-220)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A7U7JRT9

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  vicX Streptococcus mutans UA159

49.027

96.617

0.474