Detailed information    

insolico Bioinformatically predicted

Overview

Name   recX   Type   Regulator
Locus tag   NW963_RS09345 Genome accession   NZ_CP102972
Coordinates   1925699..1926517 (-) Length   272 a.a.
NCBI ID   WP_258412189.1    Uniprot ID   -
Organism   Staphylococcus aureus strain 05-RR-90     
Function   repressor of recA (predicted from homology)   
Homologous recombination

Genomic Context

Location: 1920699..1931517
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  NW963_RS09325 (NW963_09320) - 1921792..1922769 (+) 978 WP_000379098.1 metal-dependent hydrolase -
  NW963_RS09330 (NW963_09325) - 1923030..1923866 (-) 837 WP_000886456.1 hypothetical protein -
  NW963_RS09335 (NW963_09330) - 1923875..1925392 (-) 1518 WP_000535834.1 ABC transporter ATP-binding protein -
  NW963_RS09340 (NW963_09335) - 1925407..1925721 (-) 315 WP_000435806.1 YfhH family protein -
  NW963_RS09345 (NW963_09340) recX 1925699..1926517 (-) 819 WP_258412189.1 recombination regulator RecX Regulator
  NW963_RS09350 (NW963_09345) sgtB 1926778..1927587 (-) 810 WP_000830380.1 monofunctional peptidoglycan glycosyltransferase SgtB -
  NW963_RS09355 (NW963_09350) - 1927926..1928441 (-) 516 WP_000163283.1 type 1 glutamine amidotransferase domain-containing protein -
  NW963_RS09360 (NW963_09355) - 1928572..1928733 (-) 162 WP_001005407.1 SE1561 family protein -
  NW963_RS09365 (NW963_09360) - 1929080..1929181 (+) 102 WP_235310014.1 hypothetical protein -
  NW963_RS09370 (NW963_09365) - 1929390..1929575 (-) 186 Protein_1805 DNA-binding protein -

Sequence

Protein


Download         Length: 272 a.a.        Molecular weight: 32227.04 Da        Isoelectric Point: 5.9211

>NTDB_id=620537 NW963_RS09345 WP_258412189.1 1925699..1926517(-) (recX) [Staphylococcus aureus strain 05-RR-90]
MPKITKIEVQKKNKERFNLFLDEQFEMGIDIDTLVKFNLKKGQQLEAADMAEIQKYDHYRIGLNKAIQYLSYKKRTEKEV
IQYLQKEEISEQAISEVIEYCYREKLIDHQDYAESLKNTMIRTTDKGPKIYQQKLYQLGIEPNIIEIFTELYREQQELDD
IIQIAEKISKTKKGPQNKVKEKVMQSLIQKGFEMETIHAVLNEMDFTQDEGVLDDLLQRDLEKIYNKNRKKYTQQKLISK
TIEGLMRKGYKYDKIKAKLEESGIADGTEEIE

Nucleotide


Download         Length: 819 bp        

>NTDB_id=620537 NW963_RS09345 WP_258412189.1 1925699..1926517(-) (recX) [Staphylococcus aureus strain 05-RR-90]
GTGCCGAAGATTACTAAAATAGAAGTTCAAAAGAAAAACAAAGAACGTTTTAATCTTTTTTTAGACGAACAATTTGAAAT
GGGTATAGATATCGATACATTAGTCAAATTTAATTTAAAAAAAGGGCAACAACTTGAAGCTGCTGACATGGCAGAGATTC
AAAAGTATGATCATTATCGCATAGGTTTAAACAAAGCAATCCAATATTTATCATATAAAAAGAGAACTGAAAAAGAAGTT
ATACAATATTTACAAAAAGAAGAGATATCAGAGCAAGCGATTTCTGAAGTGATTGAATATTGTTATCGCGAAAAGTTAAT
CGACCATCAAGATTATGCGGAAAGTTTAAAGAATACAATGATTCGCACGACAGATAAAGGACCTAAAATTTATCAACAAA
AACTATATCAACTTGGTATAGAACCAAATATCATTGAAATATTTACAGAACTTTATAGAGAACAACAGGAACTTGATGAT
ATTATCCAAATTGCTGAAAAAATATCTAAAACAAAAAAAGGGCCACAAAATAAGGTTAAAGAAAAAGTAATGCAATCTTT
AATTCAAAAAGGGTTTGAAATGGAAACCATTCATGCTGTATTGAATGAAATGGATTTTACACAAGATGAAGGGGTTTTAG
ACGATTTATTACAACGAGATTTAGAAAAAATTTATAATAAAAATCGAAAGAAGTACACGCAACAGAAATTAATTTCAAAA
ACTATCGAAGGCCTTATGAGAAAAGGATATAAATATGATAAAATTAAAGCTAAATTAGAAGAAAGTGGTATTGCCGATGG
AACAGAAGAAATTGAGTGA

Domains

Predicted by InterProScan.

RecX family (RecX_HTH2)

(84-203)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  recX Staphylococcus aureus strain ATCC 12600

99.632

100

0.996