Detailed information    

insolico Bioinformatically predicted

Overview

Name   ceuB   Type   Machinery gene
Locus tag   NW963_RS03580 Genome accession   NZ_CP102972
Coordinates   749738..750709 (+) Length   323 a.a.
NCBI ID   WP_000876318.1    Uniprot ID   A0A0H2XIG1
Organism   Staphylococcus aureus strain 05-RR-90     
Function   DNA uptake (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 744738..755709
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  NW963_RS03560 (NW963_03560) nrdF 745853..746824 (+) 972 WP_000562498.1 class 1b ribonucleoside-diphosphate reductase subunit beta -
  NW963_RS03565 (NW963_03565) istA 747139..748431 (+) 1293 WP_258410076.1 IS21 family transposase -
  NW963_RS03570 (NW963_03570) istB 748424..749185 (+) 762 WP_001066123.1 IS21-like element helper ATPase IstB -
  NW963_RS03575 (NW963_03575) - 749544..749699 (+) 156 WP_000499195.1 hypothetical protein -
  NW963_RS03580 (NW963_03580) ceuB 749738..750709 (+) 972 WP_000876318.1 ABC transporter permease Machinery gene
  NW963_RS03585 (NW963_03585) - 750696..751652 (+) 957 WP_001245577.1 iron chelate uptake ABC transporter family permease subunit -
  NW963_RS03590 (NW963_03590) - 751649..752410 (+) 762 WP_000616840.1 ABC transporter ATP-binding protein -
  NW963_RS03595 (NW963_03595) - 752529..753557 (+) 1029 WP_258412459.1 siderophore ABC transporter substrate-binding protein -
  NW963_RS03600 (NW963_03600) - 753874..754188 (-) 315 WP_001127269.1 CHY zinc finger protein -
  NW963_RS03605 (NW963_03605) murB 754206..755129 (-) 924 WP_000608435.1 UDP-N-acetylmuramate dehydrogenase -

Sequence

Protein


Download         Length: 323 a.a.        Molecular weight: 35582.13 Da        Isoelectric Point: 10.1194

>NTDB_id=620479 NW963_RS03580 WP_000876318.1 749738..750709(+) (ceuB) [Staphylococcus aureus strain 05-RR-90]
MKYLLKGNILLLLLILLTIISLFIGVSELSIKDLLHLTESQRNILFSSRIPRTMSILIAGSSLALAGLIMQQMMQNKFVS
PTTAGTMEWAKLGILIALLFFPTGHILLKLVFAVICSICGTFLFVKIIDFIKVKDVIFVPLLGIMMGGIVASFTTFISLR
TNAVQSIGNWLNGNFAIITSGRYEILYLSIPLLALTYLFANHFTIVGMGKDFTNNLGLSYEKLINIALFITATITALVVV
TVGTLPFLGLVIPNIISIYRGDHLKNAIPHTMMLGAIFVLFSDIVGRIVVYPYEINIGLTIGVFGTIIFLILLMKGRKNY
AQQ

Nucleotide


Download         Length: 972 bp        

>NTDB_id=620479 NW963_RS03580 WP_000876318.1 749738..750709(+) (ceuB) [Staphylococcus aureus strain 05-RR-90]
ATGAAGTATTTATTAAAGGGAAATATTTTGCTTCTATTACTAATATTGTTGACAATTATTTCGTTGTTCATAGGTGTGAG
TGAACTATCAATTAAAGATTTACTACATTTAACTGAGTCACAGCGGAATATTTTATTCTCAAGCCGAATACCAAGGACGA
TGAGTATTTTAATTGCTGGAAGTTCGTTGGCTTTAGCAGGCTTGATAATGCAACAAATGATGCAAAATAAGTTTGTTAGT
CCGACTACAGCTGGAACGATGGAATGGGCTAAACTAGGTATTTTAATTGCTTTATTGTTCTTTCCAACCGGTCATATTTT
ATTAAAACTAGTATTTGCTGTTATTTGCAGTATTTGCGGTACGTTTTTATTTGTTAAAATCATTGATTTTATAAAAGTGA
AAGATGTCATTTTTGTACCGCTTCTAGGAATTATGATGGGTGGGATTGTTGCAAGTTTCACAACCTTCATCTCATTGCGC
ACGAATGCTGTTCAAAGCATTGGTAACTGGCTTAACGGGAACTTTGCCATTATCACAAGTGGACGCTATGAAATTTTATA
TTTAAGTATTCCTCTTTTAGCATTGACATATCTTTTTGCTAATCATTTCACGATTGTAGGAATGGGTAAAGACTTTACTA
ATAATTTAGGTTTGAGTTACGAAAAATTAATTAACATCGCATTGTTTATTACTGCAACTATTACAGCATTGGTAGTGGTG
ACTGTTGGAACATTACCGTTCTTAGGACTAGTAATACCAAATATTATTTCAATTTATCGAGGTGATCATTTGAAAAATGC
TATCCCTCATACGATGATGTTAGGTGCCATCTTTGTATTATTTTCTGATATAGTTGGCAGAATTGTTGTTTATCCATATG
AAATAAATATTGGTTTAACAATAGGTGTATTTGGAACAATCATTTTCCTTATCTTGCTTATGAAAGGTAGGAAAAATTAT
GCGCAACAATAA

Domains

Predicted by InterProScan.

FecCD transport family (FecCD)

(13-315)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A0H2XIG1

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  ceuB Campylobacter jejuni subsp. jejuni 81-176

47.5

99.071

0.471