Detailed information    

insolico Bioinformatically predicted

Overview

Name   vicX   Type   Regulator
Locus tag   NW975_RS00130 Genome accession   NZ_CP102971
Coordinates   32170..32970 (+) Length   266 a.a.
NCBI ID   WP_000088649.1    Uniprot ID   A0A7U7JRT9
Organism   Staphylococcus aureus strain 08-G-E     
Function   require for competence development (predicted from homology)   
Competence regulation

Genomic Context

Location: 27170..37970
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  NW975_RS00115 (NW975_00115) walK 27839..29665 (+) 1827 WP_000871607.1 cell wall metabolism sensor histidine kinase WalK -
  NW975_RS00120 (NW975_00120) yycH 29658..30992 (+) 1335 WP_001060140.1 two-component system activity regulator YycH -
  NW975_RS00125 (NW975_00125) yycI 30993..31781 (+) 789 WP_001104168.1 two-component system regulatory protein YycI -
  NW975_RS00130 (NW975_00130) vicX 32170..32970 (+) 801 WP_000088649.1 MBL fold metallo-hydrolase Regulator
  NW975_RS00135 (NW975_00135) adsA 33198..35516 (+) 2319 WP_258413986.1 LPXTG-anchored adenosine synthase AdsA -
  NW975_RS00140 (NW975_00140) rlmH 35883..36362 (+) 480 WP_000704777.1 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH -
  NW975_RS00145 (NW975_00145) - 36671..37477 (+) 807 WP_258413987.1 abortive infection family protein -

Sequence

Protein


Download         Length: 266 a.a.        Molecular weight: 30313.52 Da        Isoelectric Point: 6.3392

>NTDB_id=620379 NW975_RS00130 WP_000088649.1 32170..32970(+) (vicX) [Staphylococcus aureus strain 08-G-E]
MSRLIRMSVLASGSTGNATFVENEKGSLLVDVGLTGKKMEELFSQIDRNIQDLNGILVTHEHIDHIKGLGVLARKYQLPI
YANEKTWQAIEKKDSRIPMDQKFIFNPYETKSIAGFDVESFNVSHDAIDPQFYIFHNNYKKFTILTDTGYVSDRMKGMIR
GSDAFIFESNHDVDMLRMCRYPWKTKQRILGDMGHVSNEDAGHAMTDVITGNTKRIYLSHLSQDNNMKDLARMSVGQVLN
EHDIDTEKEVLLCDTDKAIPTPIYTI

Nucleotide


Download         Length: 801 bp        

>NTDB_id=620379 NW975_RS00130 WP_000088649.1 32170..32970(+) (vicX) [Staphylococcus aureus strain 08-G-E]
ATGAGCCGCTTGATACGCATGAGTGTATTAGCAAGTGGTAGTACAGGTAACGCCACTTTTGTAGAAAATGAAAAAGGTAG
TCTATTAGTTGATGTTGGTTTGACGGGCAAGAAAATGGAAGAATTGTTTAGTCAAATTGATCGTAATATTCAAGATTTAA
ATGGTATTTTAGTAACCCATGAACATATTGACCATATTAAAGGGTTAGGTGTTTTGGCGCGTAAATATCAATTGCCAATT
TATGCGAATGAAAAGACTTGGCAGGCAATTGAAAAGAAAGATAGTCGCATCCCTATGGATCAGAAATTCATTTTTAATCC
TTATGAAACAAAATCTATTGCAGGTTTCGATGTTGAATCGTTTAACGTGTCACATGATGCAATAGATCCGCAATTTTATA
TTTTCCATAATAACTATAAGAAGTTTACGATTTTAACGGATACGGGTTACGTGTCTGATCGTATGAAAGGTATGATACGT
GGCAGCGATGCGTTTATTTTTGAGAGTAATCATGACGTCGATATGTTGAGAATGTGTCGTTATCCATGGAAGACGAAACA
ACGTATTTTAGGCGATATGGGTCATGTATCTAATGAGGATGCGGGTCATGCGATGACAGACGTGATTACAGGTAACACGA
AACGTATTTACTTATCGCATTTATCACAAGATAATAATATGAAAGATTTGGCGCGTATGAGTGTTGGTCAAGTATTGAAC
GAACACGATATTGATACGGAAAAAGAAGTATTGCTATGTGATACGGATAAAGCTATTCCAACGCCAATATATACAATATA
A

Domains

Predicted by InterProScan.

Metallo-beta-lactamase superfamily (Lactamase_B)

(14-220)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A7U7JRT9

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  vicX Streptococcus mutans UA159

49.027

96.617

0.474