Detailed information    

insolico Bioinformatically predicted

Overview


Name   rcrQ   Type   Regulator
Locus tag   C11O2_RS01545 Genome accession   NZ_AP019548
Coordinates   276248..276727 (+) Length   159 a.a.
NCBI ID   WP_323740326.1    Uniprot ID   -
Organism   Streptococcus pyogenes strain 10-85     
Function   regulate competence (predicted from homology)   
Competence regulation

Genomic Context


Location: 271248..281727
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  C11O2_RS01530 (A85_02460) lacG 272420..273826 (+) 1407 WP_010922661.1 6-phospho-beta-galactosidase -
  C11O2_RS01535 (A85_02470) - 274329..274484 (+) 156 WP_002982773.1 type A2 lanthipeptide -
  C11O2_RS01540 (A85_02480) - 274567..276192 (+) 1626 WP_011285715.1 DUF4135 domain-containing protein -
  C11O2_RS01545 (A85_02490) rcrQ 276248..276727 (+) 480 WP_323740326.1 ABC transporter ATP-binding protein Regulator
  C11O2_RS01550 (A85_02500) - 276724..277461 (+) 738 WP_000812013.1 ABC transporter ATP-binding protein -
  C11O2_RS01555 (A85_02510) - 277463..279370 (+) 1908 WP_010922659.1 FtsX-like permease family protein -
  C11O2_RS01560 - 279410..280681 (+) 1272 Protein_251 hypothetical protein -

Sequence


Protein


Download         Length: 159 a.a.        Molecular weight: 18613.42 Da        Isoelectric Point: 6.9594

>NTDB_id=62031 C11O2_RS01545 WP_323740326.1 276248..276727(+) (rcrQ) [Streptococcus pyogenes strain 10-85]
MFDGDVMYNILLGRESVTEKQVIEICKRVSLYEDIRSMPMKFHTPLFRDNPSLSGGQKQRISLARELVTTPRILVLDEPT
SALDVKTERIIQKNVEALHCTRVLVTHRLNTVEKADKILIMDNGKIIDYGNHHYLYKNNKDYCDLYDSYMNKYQEEEVK

Nucleotide


Download         Length: 480 bp        

>NTDB_id=62031 C11O2_RS01545 WP_323740326.1 276248..276727(+) (rcrQ) [Streptococcus pyogenes strain 10-85]
ATATTTGATGGGGATGTGATGTATAACATTTTGCTAGGAAGAGAATCTGTTACAGAAAAACAAGTTATTGAAATCTGTAA
AAGGGTATCACTATATGAGGATATCAGGAGTATGCCAATGAAGTTTCATACCCCACTTTTTCGAGACAATCCATCACTAT
CTGGGGGGCAAAAACAACGAATTTCTCTAGCAAGAGAGTTAGTAACTACCCCTAGAATCTTAGTTCTTGATGAACCTACA
TCAGCTTTAGATGTAAAAACTGAAAGAATAATCCAAAAAAATGTTGAGGCTTTACATTGTACGAGGGTTTTGGTTACCCA
TAGACTTAATACAGTTGAAAAAGCTGATAAGATTTTAATAATGGATAATGGCAAAATTATTGACTATGGAAACCATCATT
ATTTGTACAAAAATAATAAGGATTATTGTGACTTATATGACTCGTATATGAATAAATATCAGGAGGAAGAGGTAAAATGA

Domains


Predicted by InterProScan.

(21-81)


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  rcrQ Streptococcus mutans UA159

37.975

99.371

0.377

  comA Streptococcus mitis NCTC 12261

39.597

93.711

0.371

  comA Streptococcus pneumoniae Rx1

38.926

93.711

0.365

  comA Streptococcus pneumoniae R6

38.926

93.711

0.365

  comA Streptococcus mitis SK321

38.926

93.711

0.365

  comA Streptococcus pneumoniae D39

38.926

93.711

0.365

  comA Streptococcus pneumoniae TIGR4

38.926

93.711

0.365


Multiple sequence alignment