Detailed information    

insolico Bioinformatically predicted

Overview


Name   htrA   Type   Regulator
Locus tag   NW965_RS08145 Genome accession   NZ_CP102968
Coordinates   1720425..1721699 (+) Length   424 a.a.
NCBI ID   WP_258414705.1    Uniprot ID   -
Organism   Staphylococcus aureus strain 13-G-52     
Function   require for competence development (predicted from homology)   
Competence regulation

Genomic Context


Location: 1715425..1726699
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  NW965_RS08125 (NW965_08120) - 1716749..1716844 (+) 96 WP_031761395.1 hypothetical protein -
  NW965_RS08130 (NW965_08125) - 1716805..1717935 (-) 1131 WP_258414704.1 HAD family hydrolase -
  NW965_RS08135 (NW965_08130) nagE 1718042..1719508 (-) 1467 WP_000276363.1 N-acetylglucosamine-specific PTS transporter subunit IIBC -
  NW965_RS08140 (NW965_08135) - 1719636..1720253 (-) 618 WP_000287588.1 1-acyl-sn-glycerol-3-phosphate acyltransferase -
  NW965_RS08145 (NW965_08140) htrA 1720425..1721699 (+) 1275 WP_258414705.1 trypsin-like peptidase domain-containing protein Regulator
  NW965_RS08150 (NW965_08145) tyrS 1721793..1723055 (-) 1263 WP_000186030.1 tyrosine--tRNA ligase -
  NW965_RS08155 (NW965_08150) - 1723437..1724342 (+) 906 WP_000184370.1 transglycosylase domain-containing protein -
  NW965_RS08160 (NW965_08155) - 1724322..1724414 (-) 93 WP_001789987.1 hypothetical protein -

Sequence


Protein


Download         Length: 424 a.a.        Molecular weight: 45774.97 Da        Isoelectric Point: 9.9610

>NTDB_id=620267 NW965_RS08145 WP_258414705.1 1720425..1721699(+) (htrA) [Staphylococcus aureus strain 13-G-52]
MSDFNHTDHSTTNHSQTPRYRRPKFPWFKTVIVALIAGIIGALLVLGIGKVLNSTILNKDGSTVQTTNNKGGNQLDGQSK
KFGTVHEMIKSVSPTIVGVINMQKASSVDDLLKGKSSKPSEAGVGSGVIYQINNNSAYIVTNNHVIDGANEIRVQLHNKK
QVKAKLVGKDAVTDIAVLKIENTKGIKAIQFANSSKVQTGDSVFAMGNPLGLQFANSVTSGIISASERTIDAETTGGNTK
VSVLQTDAAINPGNSGGALVDINGNLVGINSMKIAATQVEGIGFAIPSNEVKVTIEQLVKHGKIDRPSIGIGLINLKDIP
EEEREQLHTDREDGIYVAKADSDIDLKKGDIITEIDGKKIKDDVDLRSYLYENKKPGESVTVTVIRDGKTKEVKVKLKQQ
KEQPKRQSRSERQSPGQGDRDFFK

Nucleotide


Download         Length: 1275 bp        

>NTDB_id=620267 NW965_RS08145 WP_258414705.1 1720425..1721699(+) (htrA) [Staphylococcus aureus strain 13-G-52]
ATGTCAGATTTTAATCATACAGATCATTCTACAACAAACCATAGCCAAACACCTAGATACAGAAGACCTAAATTTCCATG
GTTTAAAACAGTCATCGTTGCATTGATTGCTGGAATTATTGGTGCACTTCTAGTACTTGGTATAGGCAAAGTATTAAATA
GTACAATTTTAAATAAAGATGGTTCAACTGTTCAGACAACAAATAATAAAGGTGGCAATCAATTAGACGGTCAAAGCAAG
AAATTCGGTACCGTTCATGAAATGATAAAATCTGTCTCCCCTACAATTGTTGGAGTTATTAACATGCAAAAAGCATCAAG
TGTAGACGACTTATTAAAAGGCAAATCATCTAAACCATCTGAAGCTGGAGTAGGTTCAGGTGTTATCTATCAAATAAACA
ACAATTCAGCTTATATCGTTACAAACAATCATGTTATTGATGGAGCAAATGAAATTAGAGTCCAATTACATAATAAAAAA
CAAGTTAAAGCAAAATTAGTTGGTAAAGATGCAGTAACTGATATTGCTGTACTTAAAATTGAAAATACAAAAGGTATTAA
AGCGATTCAATTCGCCAACTCTTCAAAAGTACAAACTGGCGATAGCGTATTCGCAATGGGTAACCCATTAGGATTACAAT
TTGCTAACTCTGTAACATCTGGTATCATTTCAGCAAGCGAACGTACTATTGACGCTGAGACAACTGGTGGCAATACAAAA
GTCAGCGTTCTTCAAACAGATGCTGCTATTAACCCAGGTAACTCAGGTGGCGCATTAGTAGATATTAATGGTAATTTAGT
TGGTATTAACTCAATGAAAATTGCTGCGACACAAGTTGAAGGTATCGGGTTTGCTATTCCAAGTAATGAAGTTAAAGTAA
CAATTGAACAACTTGTAAAGCATGGTAAAATTGACCGCCCTTCGATTGGTATTGGTTTAATTAATTTGAAAGATATTCCT
GAAGAAGAGCGCGAGCAACTTCATACTGATAGAGAAGACGGTATTTATGTCGCAAAAGCTGATAGTGATATTGATCTTAA
AAAAGGTGATATTATTACAGAAATTGATGGCAAGAAAATTAAAGATGATGTTGATTTAAGAAGCTATTTATATGAAAATA
AAAAACCTGGTGAATCAGTCACTGTTACCGTTATCCGTGATGGTAAAACAAAAGAAGTTAAAGTGAAATTAAAACAACAA
AAAGAACAACCAAAACGTCAAAGCCGATCAGAACGTCAATCACCTGGCCAAGGCGATAGAGATTTCTTTAAATAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  htrA Streptococcus mutans UA159

39.055

94.811

0.37