Detailed information    

insolico Bioinformatically predicted

Overview

Name   vicX   Type   Regulator
Locus tag   NW965_RS00120 Genome accession   NZ_CP102968
Coordinates   29964..30764 (+) Length   266 a.a.
NCBI ID   WP_258415947.1    Uniprot ID   -
Organism   Staphylococcus aureus strain 13-G-52     
Function   require for competence development (predicted from homology)   
Competence regulation

Genomic Context

Location: 24964..35764
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  NW965_RS00105 (NW965_00105) walK 25633..27459 (+) 1827 WP_000871607.1 cell wall metabolism sensor histidine kinase WalK -
  NW965_RS00110 (NW965_00110) yycH 27452..28786 (+) 1335 WP_001060140.1 two-component system activity regulator YycH -
  NW965_RS00115 (NW965_00115) yycI 28787..29575 (+) 789 WP_001104168.1 two-component system regulatory protein YycI -
  NW965_RS00120 (NW965_00120) vicX 29964..30764 (+) 801 WP_258415947.1 MBL fold metallo-hydrolase Regulator
  NW965_RS00125 (NW965_00125) adsA 30992..33310 (+) 2319 WP_258413986.1 LPXTG-anchored adenosine synthase AdsA -
  NW965_RS00130 (NW965_00130) rlmH 33677..34156 (+) 480 WP_000704777.1 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH -
  NW965_RS00135 (NW965_00135) - 34465..35271 (+) 807 WP_258413987.1 abortive infection family protein -

Sequence

Protein


Download         Length: 266 a.a.        Molecular weight: 30347.54 Da        Isoelectric Point: 6.3392

>NTDB_id=620201 NW965_RS00120 WP_258415947.1 29964..30764(+) (vicX) [Staphylococcus aureus strain 13-G-52]
MSRLIRMSVLASGSTGNATFVENEKGSLLVDVGLTGKKMEELFSQIDRNIQDLNGILVTHEHIDHIKGLGVLARKYQLPI
YANEKTWQAIEKKDSRIPMDQKFFFNPYETKSIAGFDVESFNVSHDAIDPQFYIFHNNYKKFTILTDTGYVSDRMKGMIR
GSDAFIFESNHDVDMLRMCRYPWKTKQRILGDMGHVSNEDAGHAMTDVITGNTKRIYLSHLSQDNNMKDLARMSVGQVLN
EHDIDTEKEVLLCDTDKAIPTPIYTI

Nucleotide


Download         Length: 801 bp        

>NTDB_id=620201 NW965_RS00120 WP_258415947.1 29964..30764(+) (vicX) [Staphylococcus aureus strain 13-G-52]
ATGAGCCGCTTGATACGCATGAGTGTATTAGCAAGTGGTAGTACAGGTAACGCCACTTTTGTAGAAAATGAAAAAGGTAG
TCTATTAGTTGATGTTGGTTTGACGGGCAAGAAAATGGAAGAATTGTTTAGTCAAATTGATCGTAATATTCAAGATTTAA
ATGGTATTTTAGTAACCCATGAACATATTGACCATATTAAAGGGTTAGGTGTTTTGGCGCGTAAATATCAATTGCCAATT
TATGCGAATGAAAAGACTTGGCAGGCAATTGAAAAGAAAGATAGTCGCATCCCTATGGATCAGAAATTCTTTTTTAATCC
TTATGAAACAAAATCTATTGCAGGTTTCGATGTTGAATCGTTTAACGTGTCACATGATGCAATAGATCCGCAATTTTATA
TTTTCCATAATAACTATAAGAAGTTTACGATTTTAACGGATACGGGTTACGTGTCTGATCGTATGAAAGGTATGATACGT
GGCAGCGATGCGTTTATTTTTGAGAGTAATCATGACGTCGATATGTTGAGAATGTGTCGTTATCCATGGAAGACGAAACA
ACGTATTTTAGGCGATATGGGTCATGTATCTAATGAGGATGCGGGTCATGCGATGACAGACGTGATTACAGGTAACACGA
AACGTATTTACTTATCGCATTTATCACAAGATAATAATATGAAAGATTTGGCGCGTATGAGTGTTGGTCAAGTATTGAAC
GAACACGATATTGATACGGAAAAAGAAGTATTGCTATGTGATACGGATAAAGCTATTCCAACGCCAATATATACAATATA
A

Domains

Predicted by InterProScan.

Metallo-beta-lactamase superfamily (Lactamase_B)

(14-220)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  vicX Streptococcus mutans UA159

48.638

96.617

0.47