Detailed information    

insolico Bioinformatically predicted

Overview

Name   vicX   Type   Regulator
Locus tag   NW947_RS00120 Genome accession   NZ_CP102967
Coordinates   29962..30762 (+) Length   266 a.a.
NCBI ID   WP_000088649.1    Uniprot ID   A0A7U7JRT9
Organism   Staphylococcus aureus strain 17-H-61     
Function   require for competence development (predicted from homology)   
Competence regulation

Genomic Context

Location: 24962..35762
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  NW947_RS00105 (NW947_00105) walK 25631..27457 (+) 1827 WP_258416439.1 cell wall metabolism sensor histidine kinase WalK -
  NW947_RS00110 (NW947_00110) yycH 27450..28784 (+) 1335 WP_001060149.1 two-component system activity regulator YycH -
  NW947_RS00115 (NW947_00115) yycI 28785..29573 (+) 789 WP_258416440.1 two-component system regulatory protein YycI -
  NW947_RS00120 (NW947_00120) vicX 29962..30762 (+) 801 WP_000088649.1 MBL fold metallo-hydrolase Regulator
  NW947_RS00125 (NW947_00125) adsA 30989..33307 (+) 2319 WP_000645749.1 LPXTG-anchored adenosine synthase AdsA -
  NW947_RS00130 (NW947_00130) rlmH 33675..34154 (+) 480 WP_000704777.1 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH -
  NW947_RS00135 (NW947_00135) - 34532..35332 (+) 801 WP_000749911.1 abortive infection family protein -

Sequence

Protein


Download         Length: 266 a.a.        Molecular weight: 30313.52 Da        Isoelectric Point: 6.3392

>NTDB_id=620113 NW947_RS00120 WP_000088649.1 29962..30762(+) (vicX) [Staphylococcus aureus strain 17-H-61]
MSRLIRMSVLASGSTGNATFVENEKGSLLVDVGLTGKKMEELFSQIDRNIQDLNGILVTHEHIDHIKGLGVLARKYQLPI
YANEKTWQAIEKKDSRIPMDQKFIFNPYETKSIAGFDVESFNVSHDAIDPQFYIFHNNYKKFTILTDTGYVSDRMKGMIR
GSDAFIFESNHDVDMLRMCRYPWKTKQRILGDMGHVSNEDAGHAMTDVITGNTKRIYLSHLSQDNNMKDLARMSVGQVLN
EHDIDTEKEVLLCDTDKAIPTPIYTI

Nucleotide


Download         Length: 801 bp        

>NTDB_id=620113 NW947_RS00120 WP_000088649.1 29962..30762(+) (vicX) [Staphylococcus aureus strain 17-H-61]
ATGAGCCGCTTGATACGCATGAGTGTATTAGCAAGTGGTAGTACAGGTAACGCCACTTTTGTAGAAAATGAAAAAGGTAG
TCTATTAGTTGATGTTGGTTTGACTGGCAAGAAAATGGAAGAATTGTTTAGTCAAATTGACCGTAATATTCAAGATTTAA
ATGGTATTTTAGTAACCCATGAACATATTGATCATATTAAAGGATTAGGTGTTTTGGCGCGTAAATATCAATTGCCAATT
TATGCGAATGAAAAGACTTGGCAGGCAATTGAAAAGAAAGATAGTCGCATCCCTATGGATCAGAAATTCATTTTTAATCC
TTATGAAACGAAATCTATTGCGGGTTTCGATGTTGAATCGTTTAACGTGTCACATGATGCGATAGATCCGCAATTTTATA
TTTTCCATAATAACTATAAGAAGTTTACGATTTTAACGGATACGGGTTACGTGTCTGATCGTATGAAAGGTATGATACGT
GGCAGCGATGCGTTTATTTTTGAGAGTAATCATGACGTCGATATGTTGAGAATGTGTCGTTATCCATGGAAGACGAAACA
ACGTATTTTAGGCGATATGGGTCATGTATCTAATGAGGATGCGGGTCATGCGATGACGGATGTGATTACAGGCAACACGA
AACGTATTTACCTATCACATTTATCACAAGATAATAATATGAAAGATTTGGCGCGTATGAGTGTTGGTCAAGTATTGAAC
GAACACGATATTGATACGGAAAAAGAAGTATTGCTATGTGATACGGATAAAGCTATTCCAACGCCAATATATACAATATA
A

Domains

Predicted by InterProScan.

Metallo-beta-lactamase superfamily (Lactamase_B)

(14-220)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A7U7JRT9

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  vicX Streptococcus mutans UA159

49.027

96.617

0.474