Detailed information
Bioinformatically predicted
Overview
| Name | ctsT | Type | Machinery gene |
| Locus tag | G157_RS03530 | Genome accession | NC_022347 |
| Coordinates | 712646..712951 (-) | Length | 101 a.a. |
| NCBI ID | WP_002777852.1 | Uniprot ID | A0A3Z9CUC7 |
| Organism | Campylobacter coli CVM N29710 | ||
| Function | type II secretion system/type IV pilin; DNA uptake (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 707646..717951
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| G157_RS03495 (G157_03515) | - | 708061..708822 (+) | 762 | WP_025431509.1 | ATP-binding protein | - |
| G157_RS03500 (G157_03520) | - | 708819..709502 (+) | 684 | WP_002777124.1 | 3-methyladenine DNA glycosylase | - |
| G157_RS03505 (G157_03525) | thiD | 709502..710314 (+) | 813 | WP_002786353.1 | bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase | - |
| G157_RS03510 (G157_03530) | thiE | 710304..710936 (+) | 633 | WP_002777120.1 | thiamine phosphate synthase | - |
| G157_RS03515 (G157_03535) | - | 710914..711543 (+) | 630 | WP_002777119.1 | uroporphyrinogen-III synthase | - |
| G157_RS03520 (G157_03540) | - | 711536..711988 (-) | 453 | WP_002777117.1 | hypothetical protein | - |
| G157_RS03525 (G157_03545) | - | 711985..712653 (-) | 669 | WP_021033693.1 | hypothetical protein | - |
| G157_RS03530 (G157_03550) | ctsT | 712646..712951 (-) | 306 | WP_002777852.1 | hypothetical protein | Machinery gene |
| G157_RS03535 (G157_03555) | proC | 712948..713685 (-) | 738 | WP_002780246.1 | pyrroline-5-carboxylate reductase | Machinery gene |
| G157_RS03540 (G157_03560) | fliW | 713685..714074 (-) | 390 | WP_002777093.1 | flagellar assembly protein FliW | - |
| G157_RS03545 (G157_03565) | - | 714238..714885 (+) | 648 | WP_002777091.1 | outer membrane protein assembly factor BamD | - |
| G157_RS03550 (G157_03570) | lon | 714901..717276 (+) | 2376 | WP_002783351.1 | endopeptidase La | - |
| G157_RS03555 (G157_03575) | rpsR | 717333..717593 (-) | 261 | WP_002777087.1 | 30S ribosomal protein S18 | - |
Sequence
Protein
Download Length: 101 a.a. Molecular weight: 12396.25 Da Isoelectric Point: 6.0617
>NTDB_id=62005 G157_RS03530 WP_002777852.1 712646..712951(-) (ctsT) [Campylobacter coli CVM N29710]
MKVAFSLLELILCIIILGLIFTSISKLFYQLNDNHDYLNYFERLYTLQDKLYTDPHQRDIKLHIQNLKTFDFKENFVNDN
IFQFKKLHIQNQDYSLYFYDE
MKVAFSLLELILCIIILGLIFTSISKLFYQLNDNHDYLNYFERLYTLQDKLYTDPHQRDIKLHIQNLKTFDFKENFVNDN
IFQFKKLHIQNQDYSLYFYDE
Nucleotide
Download Length: 306 bp
>NTDB_id=62005 G157_RS03530 WP_002777852.1 712646..712951(-) (ctsT) [Campylobacter coli CVM N29710]
ATGAAAGTTGCATTCTCGCTTTTAGAATTAATTCTTTGTATAATTATCCTAGGATTAATTTTTACAAGTATTTCTAAATT
ATTTTATCAGCTAAATGACAATCATGATTATTTAAATTATTTTGAAAGATTATACACACTGCAAGATAAACTTTATACCG
ATCCTCATCAAAGAGATATAAAACTTCATATACAGAATTTAAAAACTTTTGATTTTAAAGAAAACTTTGTAAATGATAAT
ATCTTTCAATTTAAAAAATTACATATTCAAAATCAAGATTACTCCCTATATTTTTACGATGAATAA
ATGAAAGTTGCATTCTCGCTTTTAGAATTAATTCTTTGTATAATTATCCTAGGATTAATTTTTACAAGTATTTCTAAATT
ATTTTATCAGCTAAATGACAATCATGATTATTTAAATTATTTTGAAAGATTATACACACTGCAAGATAAACTTTATACCG
ATCCTCATCAAAGAGATATAAAACTTCATATACAGAATTTAAAAACTTTTGATTTTAAAGAAAACTTTGTAAATGATAAT
ATCTTTCAATTTAAAAAATTACATATTCAAAATCAAGATTACTCCCTATATTTTTACGATGAATAA
Domains
No domain identified.
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| ctsT | Campylobacter jejuni subsp. jejuni 81-176 |
50 |
97.03 |
0.485 |