Detailed information    

insolico Bioinformatically predicted

Overview


Name   htrA   Type   Regulator
Locus tag   NW941_RS08735 Genome accession   NZ_CP102963
Coordinates   1802408..1803682 (+) Length   424 a.a.
NCBI ID   WP_258412576.1    Uniprot ID   -
Organism   Staphylococcus aureus strain 40-B-50     
Function   require for competence development (predicted from homology)   
Competence regulation

Genomic Context


Location: 1797408..1808682
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  NW941_RS08715 (NW941_08745) - 1798732..1798827 (+) 96 WP_216729836.1 hypothetical protein -
  NW941_RS08720 (NW941_08750) - 1798788..1799918 (-) 1131 WP_258410071.1 HAD family hydrolase -
  NW941_RS08725 (NW941_08755) nagE 1800025..1801491 (-) 1467 WP_000276367.1 N-acetylglucosamine-specific PTS transporter subunit IIBC -
  NW941_RS08730 (NW941_08760) - 1801619..1802236 (-) 618 WP_000287588.1 1-acyl-sn-glycerol-3-phosphate acyltransferase -
  NW941_RS08735 (NW941_08765) htrA 1802408..1803682 (+) 1275 WP_258412576.1 trypsin-like peptidase domain-containing protein Regulator
  NW941_RS08740 (NW941_08770) tyrS 1803776..1805038 (-) 1263 WP_000186029.1 tyrosine--tRNA ligase -
  NW941_RS08745 (NW941_08775) - 1805419..1806324 (+) 906 WP_000184370.1 transglycosylase domain-containing protein -
  NW941_RS08750 (NW941_08780) - 1806304..1806396 (-) 93 WP_001789987.1 hypothetical protein -

Sequence


Protein


Download         Length: 424 a.a.        Molecular weight: 45794.02 Da        Isoelectric Point: 10.0270

>NTDB_id=620000 NW941_RS08735 WP_258412576.1 1802408..1803682(+) (htrA) [Staphylococcus aureus strain 40-B-50]
MSDFNHTDRSTTNHSQTPRYRRPKFPWFKTVIVALIAGIIGALLVLGIGKVLNSTILNKDGSTVQTTNNKGGNQLDGQSK
KFGTVHEMIKSVSPTIVGVINMQKASSVDDLLKGKSSKPSEAGVGSGVIYQINNNSAYIVTNNHVIDGANEIRVQLHNKK
QVKAKLVGKDAVTDIAVLKIENTKGIKAIQFANSSKVQTGDSVFAMGNPLGLQFANSVTSGIISASERTIDAETTGGNTK
VSVLQTDAAINPGNSGGALVDINGNLVGINSMKIAATQVEGIGFAIPSNEVKVTIEQLVKHGKIDRPSIGIGLINLKDIP
EEEREQLHTDREDGIYVAKADSDIDLKKGDIITEIDGKKIKDDVDLRSYLYENKKPGESVTVTVIRDGKTKEVKVKLKQQ
KEQPKRQSRSERQSPGQGDRDFFK

Nucleotide


Download         Length: 1275 bp        

>NTDB_id=620000 NW941_RS08735 WP_258412576.1 1802408..1803682(+) (htrA) [Staphylococcus aureus strain 40-B-50]
ATGTCAGATTTTAATCATACAGATCGTTCTACAACAAACCATAGCCAAACACCTAGATACAGAAGACCTAAATTTCCATG
GTTTAAAACAGTCATCGTTGCATTGATTGCTGGAATTATTGGTGCACTTCTAGTACTTGGTATAGGCAAAGTATTAAATA
GTACAATTTTAAATAAAGATGGTTCAACTGTCCAGACAACAAATAATAAAGGTGGCAATCAATTAGACGGTCAAAGCAAG
AAATTCGGTACCGTTCATGAAATGATAAAATCTGTCTCCCCTACAATTGTTGGAGTTATTAACATGCAAAAAGCATCAAG
TGTAGACGACTTATTAAAAGGCAAATCATCTAAACCATCTGAAGCTGGAGTAGGTTCAGGTGTTATCTATCAAATAAACA
ACAATTCAGCTTATATCGTTACAAACAATCATGTTATTGATGGCGCAAATGAAATTAGAGTCCAATTACATAATAAAAAA
CAAGTTAAAGCGAAATTAGTTGGTAAAGATGCAGTAACTGATATTGCTGTACTTAAAATTGAAAATACAAAAGGTATTAA
AGCGATTCAATTCGCCAACTCTTCAAAAGTACAAACTGGCGATAGCGTATTCGCAATGGGTAACCCATTAGGATTACAAT
TTGCTAACTCTGTAACATCTGGTATCATTTCAGCAAGCGAACGTACGATTGACGCTGAGACAACTGGTGGCAATACAAAA
GTTAGCGTTCTTCAAACAGATGCTGCTATTAACCCAGGTAACTCAGGTGGCGCATTAGTAGATATTAATGGTAATTTAGT
TGGTATTAACTCAATGAAAATTGCTGCGACACAAGTTGAAGGTATCGGGTTTGCTATTCCAAGTAATGAAGTTAAAGTAA
CAATTGAACAACTTGTAAAACATGGTAAAATTGACCGCCCTTCGATTGGTATTGGTTTAATTAATTTGAAAGATATTCCT
GAAGAAGAGCGCGAGCAACTTCATACTGATAGAGAAGACGGTATTTATGTCGCCAAAGCTGATAGTGATATTGATCTTAA
AAAAGGTGATATTATTACAGAAATTGATGGCAAGAAAATTAAAGATGATGTTGATTTAAGAAGCTATTTATATGAAAATA
AAAAACCTGGTGAATCAGTCACTGTTACCGTTATCCGTGATGGTAAAACAAAAGAAGTTAAAGTGAAATTAAAACAACAA
AAAGAACAACCAAAACGTCAAAGCCGATCAGAACGTCAATCACCTGGCCAAGGCGATAGAGATTTCTTTAAATAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  htrA Streptococcus mutans UA159

38.806

94.811

0.368