Detailed information    

insolico Bioinformatically predicted

Overview

Name   dinR/lexA   Type   Regulator
Locus tag   NW941_RS06740 Genome accession   NZ_CP102963
Coordinates   1369801..1370424 (-) Length   207 a.a.
NCBI ID   WP_001208755.1    Uniprot ID   P65819
Organism   Staphylococcus aureus strain 40-B-50     
Function   repressor of recA; repressor of dinR (predicted from homology)   
Homologous recombination

Genomic Context

Location: 1364801..1375424
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  NW941_RS06715 (NW941_06745) rpmG 1366377..1366526 (+) 150 WP_001265708.1 50S ribosomal protein L33 -
  NW941_RS06720 (NW941_06750) rpsN 1366980..1367249 (+) 270 WP_001085655.1 30S ribosomal protein S14 -
  NW941_RS06725 (NW941_06755) guaC 1367406..1368383 (+) 978 WP_258411657.1 GMP reductase -
  NW941_RS06735 (NW941_06765) - 1368405..1369421 (+) 1017 WP_289622947.1 CAP domain-containing protein -
  NW941_RS06740 (NW941_06770) dinR/lexA 1369801..1370424 (-) 624 WP_001208755.1 transcriptional repressor LexA Regulator
  NW941_RS06745 (NW941_06775) sosA 1370567..1370800 (+) 234 WP_000499651.1 DNA damage-induced cell division inhibitor SosA -
  NW941_RS06750 (NW941_06780) - 1370936..1371175 (+) 240 WP_000071351.1 DUF896 domain-containing protein -
  NW941_RS06755 (NW941_06785) recP/tkt 1371296..1373284 (+) 1989 WP_258411658.1 transketolase Machinery gene
  NW941_RS06760 (NW941_06790) - 1373562..1373804 (+) 243 WP_000246909.1 YneF family protein -
  NW941_RS06765 (NW941_06795) - 1373791..1373889 (+) 99 WP_258411659.1 hypothetical protein -
  NW941_RS06770 (NW941_06800) - 1373983..1374450 (+) 468 WP_000966142.1 CcdC family protein -

Sequence

Protein


Download         Length: 207 a.a.        Molecular weight: 23331.55 Da        Isoelectric Point: 4.8811

>NTDB_id=619974 NW941_RS06740 WP_001208755.1 1369801..1370424(-) (dinR/lexA) [Staphylococcus aureus strain 40-B-50]
MRELTKRQSEIYNYIKQVVQMKGYPPSVREIGEAVGLASSSTVHGHLSRLEEKGYIRRDPTKPRAIEIVSDQTNDNINME
ETIHVPVIGKVTAGVPITAVENIEEYFPLPEHLTSTHNSDIFILNVVGDSMIEAGILDGDKVIVRSQTIAENGDIIVAMT
EEDEATVKRFYKEKNRYRLQPENSTMEPIYLDNVAVIGKVIGLYREM

Nucleotide


Download         Length: 624 bp        

>NTDB_id=619974 NW941_RS06740 WP_001208755.1 1369801..1370424(-) (dinR/lexA) [Staphylococcus aureus strain 40-B-50]
ATGAGAGAATTAACAAAACGACAAAGCGAAATATATAACTATATTAAACAAGTTGTTCAAATGAAAGGTTATCCGCCTAG
TGTTCGCGAAATTGGTGAAGCAGTTGGCTTAGCATCCAGTTCAACTGTTCATGGTCACCTTTCACGTCTTGAAGAAAAAG
GATATATAAGAAGAGATCCAACGAAACCACGTGCTATAGAAATTGTAAGTGATCAAACAAATGATAATATTAATATGGAA
GAAACGATTCATGTGCCAGTTATTGGTAAAGTCACAGCAGGTGTTCCTATTACCGCTGTAGAAAATATTGAAGAGTATTT
TCCATTACCTGAACACTTAACATCGACACACAATAGCGACATATTCATATTAAACGTCGTAGGCGACAGTATGATTGAGG
CTGGTATATTAGACGGAGACAAAGTAATTGTTCGCAGTCAAACCATAGCAGAAAATGGAGACATTATTGTTGCTATGACT
GAGGAAGATGAAGCAACTGTCAAACGCTTCTATAAAGAAAAAAATCGTTATCGATTACAACCTGAAAATAGTACAATGGA
GCCAATTTACCTCGACAATGTTGCTGTAATTGGGAAAGTAATTGGTTTGTACCGCGAAATGTAA

Domains

Predicted by InterProScan.

LexA DNA binding domain (LexA_DNA_bind)

(1-65)

Peptidase S24-like (Peptidase_S24)

(86-201)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB P65819

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  dinR/lexA Bacillus subtilis subsp. subtilis str. 168

66.341

99.034

0.657