Detailed information    

insolico Bioinformatically predicted

Overview

Name   kpsS   Type   Regulator
Locus tag   G157_RS01785 Genome accession   NC_022347
Coordinates   363667..364848 (+) Length   393 a.a.
NCBI ID   WP_002787827.1    Uniprot ID   -
Organism   Campylobacter coli CVM N29710     
Function   repress natural transformation (predicted from homology)   
Competence regulation

Genomic Context

Location: 358667..369848
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  G157_RS01770 (G157_01765) - 359419..360150 (+) 732 WP_002787833.1 class II aldolase/adducin family protein -
  G157_RS01775 (G157_01770) - 360147..361646 (+) 1500 WP_002787831.1 sugar phosphate nucleotidyltransferase -
  G157_RS01780 (G157_01775) - 361643..363670 (+) 2028 WP_002787829.1 capsular polysaccharide biosynthesis protein -
  G157_RS01785 (G157_01780) kpsS 363667..364848 (+) 1182 WP_002787827.1 capsule biosynthesis protein Regulator
  G157_RS01790 (G157_01785) - 364919..366040 (+) 1122 WP_002787825.1 hypothetical protein -
  G157_RS01795 (G157_01790) - 366037..367407 (+) 1371 WP_002783822.1 cytochrome P450 -
  G157_RS01800 (G157_01795) - 367404..367826 (+) 423 WP_002779166.1 hypothetical protein -
  G157_RS01805 (G157_01800) acpS 367829..368176 (-) 348 WP_002779165.1 holo-ACP synthase -
  G157_RS01810 (G157_01805) fliL 368176..368712 (-) 537 WP_002779164.1 flagellar basal body-associated protein FliL -

Sequence

Protein


Download         Length: 393 a.a.        Molecular weight: 46439.14 Da        Isoelectric Point: 9.9585

>NTDB_id=61995 G157_RS01785 WP_002787827.1 363667..364848(+) (kpsS) [Campylobacter coli CVM N29710]
MKFSDKIKKEFSGKTVLLLQGPVGTFFHRLAIKMKKNKTKVFKLNFNGGDFLFYPSGKRCKCDEKDLENFYESFFKEKKI
DAIVMYNDCRLIHAKAIKVAKGLGIGIWIFEEGYLRPYCITFEKDGVNANSSLPRDKNFYLSCNILTKESIKEIPGGFKF
MAFSTFLYWLFSFLLAPFFNNKLHHRTLYPFEFLFWFRSLYRKYLYKFTEKKLNQKIYSLEKKYFLAILQVYNDTQIKYH
YKKSIEEFIEELILSFANHARAKSYLIFKHHPMDRGYRNYSKLINELSQKYHVEGRIFYVHDTYLPTLLKNALGCITINS
TVGLSAILEGCPTKVCGNAFYDFEGLAYPKKLQFFWREAHAYKPNPSLVINFKNYLLNTNQFNGNFYKNSFLG

Nucleotide


Download         Length: 1182 bp        

>NTDB_id=61995 G157_RS01785 WP_002787827.1 363667..364848(+) (kpsS) [Campylobacter coli CVM N29710]
ATGAAATTTAGCGATAAGATTAAAAAAGAATTTAGCGGTAAAACTGTCTTGCTTTTACAAGGACCTGTAGGGACTTTTTT
TCACCGCCTTGCCATAAAGATGAAAAAAAATAAAACCAAAGTTTTTAAGCTTAATTTTAATGGAGGGGATTTTCTTTTCT
ATCCAAGTGGAAAAAGGTGCAAGTGCGACGAAAAGGATCTTGAAAATTTTTATGAGAGCTTTTTTAAAGAAAAAAAGATA
GATGCTATTGTGATGTATAATGATTGCCGTTTGATCCATGCAAAAGCTATCAAAGTAGCTAAGGGGCTTGGCATTGGTAT
TTGGATTTTTGAAGAGGGGTATTTAAGGCCTTATTGTATCACTTTTGAAAAAGATGGGGTCAATGCAAACTCCTCCTTGC
CTCGCGATAAAAATTTCTATCTTTCTTGCAATATCCTTACAAAAGAAAGCATAAAAGAAATTCCAGGTGGTTTTAAATTT
ATGGCCTTTAGTACTTTTCTGTATTGGCTTTTTTCTTTTCTGCTAGCTCCTTTTTTTAACAACAAGCTTCATCATCGCAC
CTTATATCCTTTTGAATTTTTATTTTGGTTTAGATCTTTATATAGAAAATACCTTTATAAATTCACAGAAAAAAAACTCA
ATCAAAAAATTTATAGCCTTGAAAAAAAGTATTTTTTGGCTATTTTGCAAGTTTATAATGATACGCAAATTAAGTACCAT
TATAAAAAAAGCATAGAAGAATTTATAGAAGAGCTTATCCTTTCTTTTGCAAATCACGCAAGAGCAAAGTCTTATCTTAT
CTTTAAACATCATCCTATGGATAGGGGATATAGAAATTATTCTAAACTTATAAATGAGCTAAGTCAAAAATACCATGTAG
AAGGAAGAATTTTCTATGTACATGATACTTATTTGCCTACTCTTTTAAAAAATGCTTTAGGTTGTATTACGATCAATTCT
ACAGTAGGTTTAAGTGCTATTTTAGAGGGTTGTCCTACTAAGGTTTGTGGCAATGCTTTTTATGATTTTGAAGGCCTAGC
TTATCCTAAAAAACTCCAATTTTTTTGGCGCGAAGCTCATGCTTATAAACCCAATCCTAGCTTGGTTATAAATTTTAAAA
ATTATCTTTTAAATACAAATCAGTTCAATGGCAATTTTTACAAAAATTCGTTTTTAGGTTGA

Domains

Predicted by InterproScan.

Capsule polysaccharide biosynthesis protein (Capsule_synth)

(81-387)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  kpsS Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819

87.5

99.746

0.873

Multiple sequence alignment