Detailed information    

insolico Bioinformatically predicted

Overview

Name   vicX   Type   Regulator
Locus tag   NW941_RS00125 Genome accession   NZ_CP102963
Coordinates   31912..32712 (+) Length   266 a.a.
NCBI ID   WP_000088649.1    Uniprot ID   A0A7U7JRT9
Organism   Staphylococcus aureus strain 40-B-50     
Function   require for competence development (predicted from homology)   
Competence regulation

Genomic Context

Location: 26912..37712
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  NW941_RS00110 (NW941_00110) walK 27574..29400 (+) 1827 WP_258415138.1 cell wall metabolism sensor histidine kinase WalK -
  NW941_RS00115 (NW941_00115) yycH 29393..30727 (+) 1335 WP_001060140.1 two-component system activity regulator YycH -
  NW941_RS00120 (NW941_00120) yycI 30728..31516 (+) 789 WP_001104175.1 two-component system regulatory protein YycI -
  NW941_RS00125 (NW941_00125) vicX 31912..32712 (+) 801 WP_000088649.1 MBL fold metallo-hydrolase Regulator
  NW941_RS00130 (NW941_00130) adsA 32939..35257 (+) 2319 WP_258412726.1 LPXTG-anchored adenosine synthase AdsA -
  NW941_RS00135 (NW941_00135) rlmH 35625..36104 (+) 480 WP_000704775.1 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH -
  NW941_RS00140 (NW941_00140) - 36143..37057 (+) 915 WP_258412727.1 DUF1837 domain-containing protein -

Sequence

Protein


Download         Length: 266 a.a.        Molecular weight: 30313.52 Da        Isoelectric Point: 6.3392

>NTDB_id=619936 NW941_RS00125 WP_000088649.1 31912..32712(+) (vicX) [Staphylococcus aureus strain 40-B-50]
MSRLIRMSVLASGSTGNATFVENEKGSLLVDVGLTGKKMEELFSQIDRNIQDLNGILVTHEHIDHIKGLGVLARKYQLPI
YANEKTWQAIEKKDSRIPMDQKFIFNPYETKSIAGFDVESFNVSHDAIDPQFYIFHNNYKKFTILTDTGYVSDRMKGMIR
GSDAFIFESNHDVDMLRMCRYPWKTKQRILGDMGHVSNEDAGHAMTDVITGNTKRIYLSHLSQDNNMKDLARMSVGQVLN
EHDIDTEKEVLLCDTDKAIPTPIYTI

Nucleotide


Download         Length: 801 bp        

>NTDB_id=619936 NW941_RS00125 WP_000088649.1 31912..32712(+) (vicX) [Staphylococcus aureus strain 40-B-50]
ATGAGCCGCTTGATACGCATGAGTGTATTAGCAAGTGGTAGTACAGGTAACGCCACTTTTGTAGAAAATGAAAAAGGTAG
TCTATTAGTTGATGTTGGTTTGACTGGCAAGAAAATGGAAGAATTGTTTAGTCAAATTGACCGTAATATTCAAGATTTAA
ATGGTATTTTAGTAACCCATGAACATATTGATCATATTAAAGGATTAGGTGTTTTGGCGCGTAAATATCAATTGCCAATT
TATGCGAATGAAAAGACTTGGCAGGCAATTGAAAAGAAAGATAGTCGCATCCCTATGGATCAGAAATTCATTTTTAATCC
TTATGAAACAAAATCTATTGCAGGTTTCGATGTTGAATCGTTTAATGTGTCACATGATGCAATAGATCCGCAATTTTATA
TTTTCCATAATAACTATAAGAAGTTTACGATTTTGACAGATACGGGTTACGTGTCTGATCGTATGAAAGGTATGATACGT
GGCAGCGATGCGTTTATTTTTGAGAGTAATCATGACGTCGATATGTTGAGAATGTGTCGTTATCCATGGAAGACGAAACA
ACGTATTTTAGGCGATATGGGTCATGTATCTAATGAGGATGCGGGTCATGCGATGACAGACGTGATTACAGGCAACACGA
AACGTATTTACTTATCACATTTATCACAAGATAATAACATGAAAGATTTGGCGCGTATGAGTGTTGGTCAAGTATTGAAC
GAACACGATATTGATACGGAAAAAGAAGTATTGCTATGTGATACGGATAAAGCTATTCCAACGCCAATATATACAATATA
A

Domains

Predicted by InterProScan.

Metallo-beta-lactamase superfamily (Lactamase_B)

(14-220)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A7U7JRT9

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  vicX Streptococcus mutans UA159

49.027

96.617

0.474