Detailed information    

insolico Bioinformatically predicted

Overview

Name   recX   Type   Regulator
Locus tag   NW971_RS10005 Genome accession   NZ_CP102962
Coordinates   2009377..2010195 (-) Length   272 a.a.
NCBI ID   WP_111762468.1    Uniprot ID   -
Organism   Staphylococcus aureus strain 16CS0212     
Function   repressor of recA (predicted from homology)   
Homologous recombination

Genomic Context

Location: 2004377..2015195
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  NW971_RS09985 (NW971_09985) - 2005470..2006447 (+) 978 WP_197805489.1 metal-dependent hydrolase -
  NW971_RS09990 (NW971_09990) - 2006708..2007544 (-) 837 WP_258464379.1 hypothetical protein -
  NW971_RS09995 (NW971_09995) - 2007553..2009070 (-) 1518 WP_258464380.1 ABC transporter ATP-binding protein -
  NW971_RS10000 (NW971_10000) - 2009085..2009399 (-) 315 WP_000435806.1 YfhH family protein -
  NW971_RS10005 (NW971_10005) recX 2009377..2010195 (-) 819 WP_111762468.1 recombination regulator RecX Regulator
  NW971_RS10010 (NW971_10010) sgtB 2010456..2011265 (-) 810 WP_000830380.1 monofunctional peptidoglycan glycosyltransferase SgtB -
  NW971_RS10015 (NW971_10015) - 2011605..2012120 (-) 516 WP_000163283.1 type 1 glutamine amidotransferase domain-containing protein -
  NW971_RS10020 (NW971_10020) - 2012250..2012411 (-) 162 WP_001005407.1 SE1561 family protein -
  NW971_RS10025 (NW971_10025) yfkAB 2012635..2013786 (+) 1152 WP_001089617.1 radical SAM/CxCxxxxC motif protein YfkAB -
  NW971_RS10030 (NW971_10030) - 2014046..2014576 (-) 531 WP_000184381.1 acyl-CoA thioesterase -

Sequence

Protein


Download         Length: 272 a.a.        Molecular weight: 32241.06 Da        Isoelectric Point: 5.9211

>NTDB_id=619918 NW971_RS10005 WP_111762468.1 2009377..2010195(-) (recX) [Staphylococcus aureus strain 16CS0212]
MPKITKIEVQKKNKERFNLFLDEQFEMGIDIDTLVKFNLKKGQQLEAADMAEIQKYDHYRIGLNKAIQYLSYKKRTEKEV
IQYLQKEEISEQAISEVIEYCYREKLIDHQDYAESLKNTMIRTTDKGPKIYQQKLYQLGIEPNIIEMFTELYREQQELDD
IIQIAEKISKTKKGPQNKVKEKVIQSLIQKGFEMETIHAVLNEMDFTQDEAVLDDLLQRDLEKIYNKNRKKYTQQKLISK
TIEGLMRKGYKYDKIKAKLEESGIADGTEEIE

Nucleotide


Download         Length: 819 bp        

>NTDB_id=619918 NW971_RS10005 WP_111762468.1 2009377..2010195(-) (recX) [Staphylococcus aureus strain 16CS0212]
GTGCCGAAGATTACTAAAATAGAAGTTCAAAAGAAAAACAAAGAACGTTTTAATCTTTTTTTAGACGAACAATTTGAAAT
GGGTATAGATATCGATACATTAGTCAAATTTAATTTAAAAAAAGGGCAACAACTTGAAGCTGCTGACATGGCAGAGATTC
AAAAGTATGATCATTATCGCATAGGTTTAAATAAAGCAATCCAATATTTATCATATAAAAAGAGAACTGAAAAAGAAGTT
ATACAATATTTACAAAAAGAAGAGATATCAGAGCAAGCGATTTCTGAAGTGATTGAATATTGTTATCGCGAAAAGTTAAT
CGACCATCAAGATTATGCGGAAAGTTTAAAAAATACAATGATTCGCACGACAGATAAAGGACCTAAAATTTATCAACAAA
AACTATATCAACTTGGTATAGAACCAAATATCATTGAAATGTTTACAGAACTTTATAGAGAACAACAGGAACTTGATGAT
ATTATCCAAATTGCTGAAAAAATATCTAAAACAAAAAAAGGGCCACAAAATAAGGTTAAAGAAAAAGTAATACAATCTTT
AATTCAAAAAGGGTTTGAAATGGAAACCATTCATGCTGTATTGAATGAAATGGATTTTACACAAGATGAAGCGGTTTTAG
ACGATTTATTACAACGAGATTTAGAAAAAATTTATAATAAAAATCGAAAGAAGTACACGCAACAGAAATTAATTTCAAAA
ACTATCGAAGGCCTTATGAGAAAAGGATATAAATATGATAAAATTAAAGCTAAATTAGAAGAAAGTGGTATTGCCGATGG
AACAGAAGAAATTGAGTGA

Domains

Predicted by InterProScan.

RecX family (RecX_HTH2)

(84-203)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  recX Staphylococcus aureus strain ATCC 12600

99.265

100

0.993