Detailed information NTG0061987

Bioinformatically predicted

Overview

• Name: cqsA
• Type: Regulator
• Locus tag: M892_RS20995
• Genome accession: NC_022270
• Coordinates: 823509..824810 (-)
• Length: 433 a.a.
• NCBI ID: WP_012129594.1
• Uniprot ID: -
• Organism: Vibrio campbellii ATCC BAA-1116
• Function: induction of competence (predicted from homology) Competence regulation

Genomic Context

Location: 818509..829810

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
M892_RS20980 (M892_21480)	-	819337..819954 (-)	618	WP_012129596.1	HAD family phosphatase	-
M892_RS20985 (M892_21485)	-	820092..821123 (-)	1032	WP_011999171.1	IS630 family transposase	-
M892_RS20990 (M892_21490)	cqsS	821357..823402 (+)	2046	WP_012129595.1	hybrid sensor histidine kinase/response regulator	Regulator
M892_RS20995 (M892_21495)	cqsA	823509..824810 (-)	1302	WP_012129594.1	alpha-hydroxyketone-type quorum-sensing autoinducer synthase	Regulator
M892_RS21000 (M892_21500)	ylqF	825100..826044 (-)	945	WP_005426767.1	ribosome biogenesis GTPase YlqF	-
M892_RS28955	-	826596..827391 (+)	796	WP_086028432.1	IS5-like element ISVha3 family transposase	-
M892_RS21015 (M892_21515)	-	827593..827946 (+)	354	Protein_753	helix-turn-helix domain-containing protein	-
M892_RS21025	-	828025..829142 (+)	1118	Protein_754	IS3 family transposase	-
M892_RS21030 (M892_21530)	-	829208..829633 (+)	426	Protein_755	DUF2913 family protein	-

Sequence

Protein

• Length: 433 a.a.
• Molecular weight: 48847.85 Da
• Isoelectric Point: 6.6137

>NTDB_id=61987 M892_RS20995 WP_012129594.1 823509..824810(-) (cqsA) [Vibrio campbellii ATCC BAA-1116]
MRSLQAHANLCNLTNDTELILVKLYNCQRWRFPVLRRELIMSDKPKTKPLPSFVEGRLDFYIQDLIEQNENQKHLVLGKR
PQQGAVVMQSNDYLSLSHNLQIQQAHRDAIYEHDDNVVMSAIFLQDDDSKPAFETQLAEYVGMGSCLLSQSGWAANIGLL
QTICPPETPVYIDFFAHMSLWEGIRAAGAQAHPFMHNNMNHLRKQIQRNGSGVIVVDSVYSTIGTIAPLRDIYEMAREFD
CALVVDESHSLGTHGPNGSGLVKALELTEQVDFITVSLAKTFAYRAGAILGPEKLARTLPFVAFPAIFSSTVLPQEIVRL
EKTLEVIRSADDKRTMLFKRAKELRTGLKQIGFHIRSESQIVALECGSERNTERVRDFLEERNVFGAVFCRPATGKNKNI
IRFSINADMTSRDIDHVLTACQEAYNHPELEFA

Nucleotide

• Length: 1302 bp

>NTDB_id=61987 M892_RS20995 WP_012129594.1 823509..824810(-) (cqsA) [Vibrio campbellii ATCC BAA-1116]
ATGCGGAGTTTGCAGGCGCACGCAAACTTATGCAACTTGACTAATGACACCGAACTCATATTAGTCAAACTATATAACTG
TCAGCGCTGGCGTTTTCCTGTGTTACGAAGAGAACTTATTATGAGTGATAAACCGAAAACAAAACCACTTCCTTCCTTTG
TTGAGGGACGCCTAGACTTTTATATTCAAGATCTGATTGAGCAGAACGAAAACCAAAAGCACTTGGTATTAGGGAAGCGA
CCACAACAAGGAGCGGTGGTCATGCAAAGTAACGACTACTTGTCGTTGTCCCACAATCTACAAATTCAACAGGCACATCG
TGATGCTATCTACGAGCACGATGATAACGTTGTCATGTCTGCGATTTTCTTACAAGATGACGACTCAAAACCTGCATTTG
AAACGCAGCTCGCGGAGTATGTCGGTATGGGCAGTTGCCTATTATCCCAGTCCGGATGGGCAGCCAATATTGGCTTGTTA
CAAACGATTTGTCCGCCAGAAACACCAGTCTATATCGATTTCTTTGCACACATGTCTTTGTGGGAAGGGATTCGAGCGGC
AGGAGCGCAAGCGCATCCATTCATGCATAACAACATGAACCATTTGCGCAAGCAGATACAGCGTAACGGCTCTGGCGTTA
TCGTTGTGGATTCGGTCTATAGCACGATAGGTACGATCGCCCCACTCCGCGACATCTACGAAATGGCGCGTGAGTTTGAT
TGTGCTTTGGTGGTCGATGAGTCCCACTCATTAGGCACGCATGGGCCAAATGGTTCTGGCTTGGTGAAAGCATTGGAACT
CACTGAGCAAGTGGATTTCATTACGGTGAGTTTGGCAAAAACATTTGCTTATCGCGCCGGGGCGATTCTTGGTCCAGAAA
AGTTGGCTAGAACGCTACCCTTTGTCGCATTCCCAGCCATCTTTAGTTCGACGGTCCTTCCACAAGAGATCGTTCGACTT
GAAAAGACTCTCGAAGTCATTAGAAGCGCAGATGATAAGCGAACCATGCTGTTCAAGCGCGCTAAAGAGCTCAGAACAGG
CCTAAAGCAGATTGGCTTTCATATCCGCAGCGAATCGCAAATTGTGGCGTTAGAATGCGGTAGTGAGCGAAATACGGAAC
GAGTGCGTGACTTCTTAGAAGAACGAAACGTGTTTGGCGCTGTATTCTGTCGTCCTGCAACGGGCAAGAATAAGAACATT
ATTCGATTTTCGATCAATGCTGATATGACATCTCGTGACATTGACCATGTCTTGACGGCTTGTCAGGAAGCGTATAACCA
CCCAGAACTAGAATTCGCCTAA

Domains

Predicted by InterproScan.

• Aminotransferase class I and II (Aminotran_1_2) (87-419)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
cqsA	Vibrio cholerae strain A1552	56.923	90.069	0.513