Detailed information    

insolico Bioinformatically predicted

Overview

Name   sxy/tfoX   Type   Regulator
Locus tag   LJU37_RS17080 Genome accession   NZ_CP085767
Coordinates   3618677..3619303 (+) Length   208 a.a.
NCBI ID   WP_023299743.1    Uniprot ID   A0A9X7L0J6
Organism   Enterobacter hormaechei strain 49589CZ     
Function   positive regulator of competence gene (predicted from homology)   
Competence regulation

Genomic Context

Location: 3613677..3624303
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  LJU37_RS17060 (LJU37_17060) - 3614076..3615836 (-) 1761 WP_047051699.1 Lon protease family protein -
  LJU37_RS17065 (LJU37_17065) matP 3616023..3616475 (+) 453 WP_003858158.1 macrodomain Ter protein MatP -
  LJU37_RS17070 (LJU37_17070) ompA 3616541..3617593 (-) 1053 WP_017694761.1 porin OmpA -
  LJU37_RS17075 (LJU37_17075) sulA 3617950..3618459 (-) 510 WP_047051722.1 SOS-induced cell division inhibitor SulA -
  LJU37_RS17080 (LJU37_17080) sxy/tfoX 3618677..3619303 (+) 627 WP_023299743.1 TfoX/Sxy family DNA transformation protein Regulator
  LJU37_RS17085 (LJU37_17085) yccS 3619260..3621422 (-) 2163 WP_047051698.1 YccS family putative transporter -
  LJU37_RS17090 (LJU37_17090) - 3621441..3621887 (-) 447 WP_003858149.1 YccF domain-containing protein -
  LJU37_RS17095 (LJU37_17095) helD 3622010..3624064 (+) 2055 WP_047051697.1 DNA helicase IV -

Sequence

Protein


Download         Length: 208 a.a.        Molecular weight: 23988.54 Da        Isoelectric Point: 9.4592

>NTDB_id=619863 LJU37_RS17080 WP_023299743.1 3618677..3619303(+) (sxy/tfoX) [Enterobacter hormaechei strain 49589CZ]
MKKISYDRIYQSQEYLSPLGEIHHRALFGGYTLAVDEAVFAMVSDGELYLRACEQSAKYCVKNASSFLTLMKRGRPVLLN
YYRVDEGLWQNREKLLQLSSFALDAARKERYQRHQRNRLKDLPNLTFQIEVLLMEAGITNEETLRQLGAKTSWLKMRSKN
KALSIRVLFALEGAIEGLHEAALPADIRRELTEWFNALPESQGHHSAR

Nucleotide


Download         Length: 627 bp        

>NTDB_id=619863 LJU37_RS17080 WP_023299743.1 3618677..3619303(+) (sxy/tfoX) [Enterobacter hormaechei strain 49589CZ]
ATGAAAAAGATATCTTATGATCGGATTTATCAATCTCAGGAATACCTCTCTCCGCTGGGCGAAATTCATCATCGCGCCCT
GTTTGGCGGTTATACCCTGGCCGTGGATGAAGCGGTGTTCGCGATGGTGTCTGACGGCGAGCTGTACCTTCGCGCCTGTG
AGCAAAGTGCAAAATACTGTGTAAAAAACGCCTCCTCTTTTCTGACCCTGATGAAACGAGGACGCCCAGTGCTGCTTAAT
TACTACCGTGTGGACGAAGGTCTGTGGCAAAACAGGGAAAAACTGCTTCAGCTCTCCTCGTTTGCGCTCGATGCTGCCAG
GAAAGAGCGCTACCAGCGCCATCAGCGTAACCGGCTTAAAGATCTGCCGAACCTGACATTTCAGATTGAGGTCCTGCTTA
TGGAGGCGGGCATTACCAATGAAGAGACGCTACGACAGTTGGGAGCAAAGACGAGCTGGCTGAAAATGCGCTCTAAGAAT
AAAGCGCTGAGTATCCGGGTATTGTTCGCGCTTGAAGGCGCCATTGAAGGGTTACATGAAGCGGCACTCCCGGCGGATAT
TCGCCGGGAGCTTACGGAGTGGTTTAATGCGCTGCCTGAGTCGCAGGGCCATCATTCCGCCAGGTAG

Domains

Predicted by InterproScan.

TfoX C-terminal domain (TfoX_C)

(116-194)

TfoX N-terminal domain (TfoX_N)

(14-106)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  sxy/tfoX Escherichia coli BW25113 strain K-12

58.911

97.115

0.572