Detailed information    

insolico Bioinformatically predicted

Overview

Name   recX   Type   Regulator
Locus tag   NW973_RS09830 Genome accession   NZ_CP102961
Coordinates   1992628..1993446 (-) Length   272 a.a.
NCBI ID   WP_258410753.1    Uniprot ID   -
Organism   Staphylococcus aureus strain 03-RR-88     
Function   repressor of recA (predicted from homology)   
Homologous recombination

Genomic Context

Location: 1987628..1998446
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  NW973_RS09810 (NW973_09810) - 1988721..1989698 (+) 978 WP_216745712.1 metal-dependent hydrolase -
  NW973_RS09815 (NW973_09815) - 1989959..1990795 (-) 837 WP_216745711.1 hypothetical protein -
  NW973_RS09820 (NW973_09820) - 1990804..1992321 (-) 1518 WP_000535834.1 ABC transporter ATP-binding protein -
  NW973_RS09825 (NW973_09825) - 1992336..1992650 (-) 315 WP_000435806.1 YfhH family protein -
  NW973_RS09830 (NW973_09830) recX 1992628..1993446 (-) 819 WP_258410753.1 recombination regulator RecX Regulator
  NW973_RS09835 (NW973_09835) sgtB 1993707..1994516 (-) 810 WP_000830380.1 monofunctional peptidoglycan glycosyltransferase SgtB -
  NW973_RS09840 (NW973_09840) - 1994855..1995370 (-) 516 WP_000163283.1 type 1 glutamine amidotransferase domain-containing protein -
  NW973_RS09845 (NW973_09845) - 1995501..1995662 (-) 162 WP_001005407.1 SE1561 family protein -
  NW973_RS09850 (NW973_09850) yfkAB 1995886..1997037 (+) 1152 WP_001089622.1 radical SAM/CxCxxxxC motif protein YfkAB -
  NW973_RS09855 (NW973_09855) - 1997297..1997827 (-) 531 WP_000184383.1 acyl-CoA thioesterase -

Sequence

Protein


Download         Length: 272 a.a.        Molecular weight: 32259.10 Da        Isoelectric Point: 5.9211

>NTDB_id=619829 NW973_RS09830 WP_258410753.1 1992628..1993446(-) (recX) [Staphylococcus aureus strain 03-RR-88]
MPKITKIEVQKKNKERFNLFLDEQFEMGIDIDTLVKFNLKKGQQLEAADMAEIQKYDHYRIGLNKAIQYLSYKKRTEKEV
IQYLQKEEISEQAISEVIEYCYREKLIDHQDYAESLKNTMIRTTDKGPKIYQQKLYQLGIEPNIIEMFTELYREQQELDD
ILQIAEKISKTKKGPQNKVKEKVMQSLIQKGFEMETIHAVLNEMDFTQDEAVLDDLLQRDLEKIYNKNRKKYTQQKLISK
TIEGLMRKGYKYDKIKAKLEESGIADGTEEIE

Nucleotide


Download         Length: 819 bp        

>NTDB_id=619829 NW973_RS09830 WP_258410753.1 1992628..1993446(-) (recX) [Staphylococcus aureus strain 03-RR-88]
GTGCCGAAGATTACTAAAATAGAAGTTCAAAAGAAAAACAAAGAACGTTTTAATCTTTTTTTAGACGAACAATTTGAAAT
GGGTATAGATATCGATACATTAGTCAAATTTAATTTAAAAAAAGGGCAACAACTTGAAGCTGCTGACATGGCAGAGATTC
AAAAGTATGATCATTATCGCATAGGTTTAAACAAAGCAATCCAATATTTATCATATAAAAAGAGAACTGAAAAAGAAGTT
ATACAATATTTACAAAAAGAAGAGATATCAGAGCAAGCGATTTCTGAAGTGATTGAATATTGTTATCGCGAAAAGTTAAT
CGACCATCAAGATTATGCGGAAAGTTTAAAGAATACAATGATTCGCACGACAGATAAAGGACCTAAAATTTATCAACAAA
AACTATATCAACTTGGTATAGAACCAAATATCATTGAAATGTTTACAGAACTTTATAGAGAACAACAGGAACTTGATGAT
ATTCTCCAAATTGCTGAAAAAATATCTAAAACAAAAAAAGGGCCACAAAATAAGGTTAAAGAAAAAGTAATGCAATCTTT
AATTCAAAAAGGGTTTGAAATGGAAACCATTCATGCTGTATTGAATGAAATGGATTTTACACAAGATGAAGCGGTTTTAG
ACGATTTATTACAACGAGATTTAGAAAAAATTTATAATAAAAATCGAAAGAAGTACACGCAACAGAAATTAATTTCAAAA
ACTATCGAAGGCCTTATGAGAAAAGGATATAAATATGATAAAATTAAAGCTAAATTAGAAGAAAGTGGTATTGCCGATGG
AACAGAAGAAATTGAGTGA

Domains

Predicted by InterProScan.

RecX family (RecX_HTH2)

(84-203)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  recX Staphylococcus aureus strain ATCC 12600

99.265

100

0.993