Detailed information NTG0061980

Bioinformatically predicted

Overview

• Name: luxO
• Type: Regulator
• Locus tag: M892_RS16105
• Genome accession: NC_022269
• Coordinates: 3494750..3496153 (+)
• Length: 467 a.a.
• NCBI ID: WP_012128494.1
• Uniprot ID: A7MVC2
• Organism: Vibrio campbellii ATCC BAA-1116
• Function: promote HapR production (predicted from homology) Competence regulation

Genomic Context

Location: 3489750..3501153

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
M892_RS16095 (M892_16170)	uvrB	3492377..3494407 (+)	2031	WP_005531398.1	excinuclease ABC subunit UvrB	-
M892_RS16105 (M892_16180)	luxO	3494750..3496153 (+)	1404	WP_012128494.1	quorum-sensing sigma-54 dependent transcriptional regulator LuxO	Regulator
M892_RS16110 (M892_16185)	luxU	3496150..3496494 (+)	345	WP_012128493.1	quorum-sensing phosphorelay protein LuxU	-
M892_RS29950	-	3496701..3496998 (+)	298	Protein_3128	IS66 family insertion sequence element accessory protein TnpB	-
M892_RS29955	tnpB	3497004..3497348 (+)	345	WP_225247096.1	IS66 family insertion sequence element accessory protein TnpB	-
M892_RS16120 (M892_16195)	-	3497409..3498953 (+)	1545	WP_021018019.1	IS66 family transposase	-
M892_RS16125 (M892_16200)	-	3498972..3499877 (-)	906	WP_012128491.1	YvcK family protein	-

Sequence

Protein

• Length: 467 a.a.
• Molecular weight: 52135.71 Da
• Isoelectric Point: 6.2518

>NTDB_id=61980 M892_RS16105 WP_012128494.1 3494750..3496153(+) (luxO) [Vibrio campbellii ATCC BAA-1116]
MQQITEGQKSRYLLMVEDTASVAALYRSYLTPLGIDINIVGTGRDAIESLNHRIPDLILLDLRLPDMTGMDVLHAVKKSH
PDVPIIFMTAHGSIDTAVEAMRHGSQDFLIKPCEADRLRVTVNNAIRKATKLKNEADNPGNQNYQGFIGSSQTMQQVYRT
IDSAASSKASIFITGESGTGKEVCAEAIHAASKRGDKPFIAINCAAIPKDLIESELFGHVKGAFTGAANDRQGAAELADG
GTLFLDELCEMDLDLQTKLLRFIQTGTFQKVGSSKMKSVDVRFVCATNRDPWKEVQEGRFREDLYYRLYVIPLHLPPLRE
RGKDVIEIAYSLLGYMSHEEGKSFVRFAQDVIERFNSYEWPGNVRQLQNVLRNIVVLNNGKEITLDMLPPPLNQPVVRQS
VAKFIEPDIMTVSDIMPLWMTEKMAIEQAIQACEGNIPRAAGYLDVSPSTIYRKLQAWNSKDEKQNV

Nucleotide

• Length: 1404 bp

>NTDB_id=61980 M892_RS16105 WP_012128494.1 3494750..3496153(+) (luxO) [Vibrio campbellii ATCC BAA-1116]
ATGCAACAAATAACAGAAGGTCAAAAGTCTCGTTATCTACTTATGGTAGAAGACACCGCATCCGTTGCGGCACTTTACCG
CTCTTACCTCACGCCACTTGGCATCGATATCAATATTGTTGGAACAGGCAGAGACGCCATTGAAAGCCTGAACCATCGCA
TTCCTGATCTTATTCTGCTCGATCTTCGTCTACCTGATATGACGGGGATGGACGTATTGCACGCGGTGAAGAAAAGCCAC
CCAGACGTGCCAATCATCTTCATGACAGCCCATGGTTCTATCGATACTGCGGTAGAGGCGATGCGCCACGGTTCTCAAGA
CTTCCTAATCAAACCATGTGAAGCAGACCGTTTACGTGTCACGGTGAACAATGCGATCCGTAAAGCAACCAAATTAAAGA
ATGAAGCTGACAACCCCGGTAACCAAAATTACCAAGGCTTCATCGGCAGTAGCCAAACGATGCAGCAGGTTTACCGCACC
ATTGACTCGGCAGCGAGCAGTAAAGCGAGTATTTTCATCACGGGTGAAAGTGGTACGGGTAAAGAAGTGTGTGCCGAAGC
GATTCACGCAGCAAGCAAACGCGGTGATAAGCCGTTTATCGCCATCAACTGTGCGGCAATCCCGAAAGACCTTATTGAAA
GTGAGCTGTTTGGTCACGTAAAAGGTGCGTTTACTGGTGCTGCGAATGACCGACAAGGTGCGGCAGAGCTTGCTGATGGC
GGCACCTTGTTCCTTGATGAACTCTGTGAAATGGACTTGGATCTTCAAACTAAGCTATTGCGCTTTATCCAAACGGGTAC
ATTCCAAAAAGTCGGTTCTTCTAAAATGAAGAGCGTGGATGTGCGCTTTGTGTGTGCAACTAACCGAGACCCTTGGAAAG
AAGTGCAAGAAGGCCGTTTCCGTGAAGACTTGTATTACCGTTTGTACGTGATTCCTTTGCACCTTCCGCCGCTGCGTGAG
CGTGGTAAAGACGTTATTGAAATTGCATACTCGTTGCTTGGTTATATGTCTCATGAGGAAGGTAAGAGTTTCGTCCGTTT
CGCACAAGACGTGATTGAAAGATTCAACAGCTACGAATGGCCGGGTAACGTTCGCCAGTTGCAAAACGTATTGCGTAATA
TCGTGGTACTGAACAATGGCAAAGAGATCACGCTGGATATGTTACCGCCACCACTGAATCAGCCTGTTGTGCGCCAATCG
GTAGCAAAATTCATTGAACCTGACATTATGACGGTGTCAGATATTATGCCGCTTTGGATGACAGAGAAAATGGCTATTGA
GCAGGCAATTCAAGCGTGTGAAGGCAACATTCCACGCGCTGCTGGCTATTTGGATGTTAGTCCATCAACGATTTATCGCA
AGTTGCAAGCTTGGAATAGCAAGGACGAAAAACAAAACGTATGA

Domains

Predicted by InterproScan.

• Bacterial regulatory protein, Fis family (HTH_8) (418-458)

• Response regulator receiver domain (Response_reg) (14-122)

• Sigma-54 interaction domain (Sigma54_activat) (148-313)

3D structure

• AlphaFold DB: A7MVC2

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
luxO	Vibrio cholerae strain A1552	86.384	95.931	0.829