Detailed information    

insolico Bioinformatically predicted

Overview

Name   dinR/lexA   Type   Regulator
Locus tag   NW973_RS06585 Genome accession   NZ_CP102961
Coordinates   1349208..1349831 (-) Length   207 a.a.
NCBI ID   WP_001208755.1    Uniprot ID   P65819
Organism   Staphylococcus aureus strain 03-RR-88     
Function   repressor of recA; repressor of dinR (predicted from homology)   
Homologous recombination

Genomic Context

Location: 1344208..1354831
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  NW973_RS06560 (NW973_06560) rpmG 1345784..1345933 (+) 150 WP_001265708.1 50S ribosomal protein L33 -
  NW973_RS06565 (NW973_06565) rpsN 1346387..1346656 (+) 270 WP_001085655.1 30S ribosomal protein S14 -
  NW973_RS06570 (NW973_06570) guaC 1346813..1347790 (+) 978 WP_000688122.1 GMP reductase -
  NW973_RS06580 (NW973_06580) - 1347812..1348828 (+) 1017 WP_289622945.1 CAP domain-containing protein -
  NW973_RS06585 (NW973_06585) dinR/lexA 1349208..1349831 (-) 624 WP_001208755.1 transcriptional repressor LexA Regulator
  NW973_RS06590 (NW973_06590) sosA 1349974..1350207 (+) 234 WP_258411127.1 DNA damage-induced cell division inhibitor SosA -
  NW973_RS06595 (NW973_06595) - 1350343..1350582 (+) 240 WP_000071351.1 DUF896 domain-containing protein -
  NW973_RS06600 (NW973_06600) recP/tkt 1350703..1352691 (+) 1989 WP_070004986.1 transketolase Machinery gene
  NW973_RS06605 (NW973_06605) - 1352969..1353211 (+) 243 WP_000246909.1 YneF family protein -
  NW973_RS06610 (NW973_06610) - 1353198..1353296 (+) 99 WP_031866183.1 hypothetical protein -
  NW973_RS06615 (NW973_06615) - 1353390..1353857 (+) 468 WP_000966142.1 CcdC family protein -

Sequence

Protein


Download         Length: 207 a.a.        Molecular weight: 23331.55 Da        Isoelectric Point: 4.8811

>NTDB_id=619798 NW973_RS06585 WP_001208755.1 1349208..1349831(-) (dinR/lexA) [Staphylococcus aureus strain 03-RR-88]
MRELTKRQSEIYNYIKQVVQMKGYPPSVREIGEAVGLASSSTVHGHLSRLEEKGYIRRDPTKPRAIEIVSDQTNDNINME
ETIHVPVIGKVTAGVPITAVENIEEYFPLPEHLTSTHNSDIFILNVVGDSMIEAGILDGDKVIVRSQTIAENGDIIVAMT
EEDEATVKRFYKEKNRYRLQPENSTMEPIYLDNVAVIGKVIGLYREM

Nucleotide


Download         Length: 624 bp        

>NTDB_id=619798 NW973_RS06585 WP_001208755.1 1349208..1349831(-) (dinR/lexA) [Staphylococcus aureus strain 03-RR-88]
ATGAGAGAATTAACAAAACGACAAAGCGAAATATATAACTATATTAAACAAGTTGTTCAAATGAAAGGTTATCCGCCTAG
TGTTCGCGAAATTGGTGAAGCAGTTGGCTTAGCATCCAGTTCAACTGTTCATGGTCACCTTTCACGTCTTGAAGAAAAAG
GCTATATAAGAAGAGATCCAACGAAACCACGTGCTATAGAAATTGTAAGTGATCAAACAAATGATAATATTAATATGGAA
GAAACGATTCATGTGCCAGTTATTGGTAAAGTCACAGCGGGTGTTCCTATTACCGCAGTAGAAAATATTGAAGAATATTT
TCCATTACCTGAACACTTAACATCGACACACAATAGCGACATATTCATATTAAACGTCGTAGGCGACAGTATGATTGAGG
CTGGTATATTAGACGGAGACAAAGTAATTGTTCGCAGTCAAACCATAGCAGAAAATGGAGACATTATTGTTGCTATGACT
GAGGAAGATGAAGCAACTGTCAAACGCTTCTATAAAGAAAAAAATCGTTATCGATTACAACCTGAAAATAGTACAATGGA
GCCAATTTACCTCGACAATGTTGCTGTAATTGGGAAAGTAATTGGTTTGTACCGCGAAATGTAA

Domains

Predicted by InterProScan.

LexA DNA binding domain (LexA_DNA_bind)

(1-65)

Peptidase S24-like (Peptidase_S24)

(86-201)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB P65819

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  dinR/lexA Bacillus subtilis subsp. subtilis str. 168

66.341

99.034

0.657