Detailed information    

insolico Bioinformatically predicted

Overview

Name   vicX   Type   Regulator
Locus tag   NW973_RS00120 Genome accession   NZ_CP102961
Coordinates   29975..30775 (+) Length   266 a.a.
NCBI ID   WP_258410895.1    Uniprot ID   -
Organism   Staphylococcus aureus strain 03-RR-88     
Function   require for competence development (predicted from homology)   
Competence regulation

Genomic Context

Location: 24975..35775
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  NW973_RS00105 (NW973_00105) walK 25644..27470 (+) 1827 WP_000871607.1 cell wall metabolism sensor histidine kinase WalK -
  NW973_RS00110 (NW973_00110) yycH 27463..28797 (+) 1335 WP_001060140.1 two-component system activity regulator YycH -
  NW973_RS00115 (NW973_00115) yycI 28798..29586 (+) 789 WP_001104168.1 two-component system regulatory protein YycI -
  NW973_RS00120 (NW973_00120) vicX 29975..30775 (+) 801 WP_258410895.1 MBL fold metallo-hydrolase Regulator
  NW973_RS00125 (NW973_00125) adsA 31003..33321 (+) 2319 WP_258410896.1 LPXTG-anchored adenosine synthase AdsA -
  NW973_RS00130 (NW973_00130) rlmH 33690..34169 (+) 480 WP_061838709.1 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH -

Sequence

Protein


Download         Length: 266 a.a.        Molecular weight: 30303.48 Da        Isoelectric Point: 6.3392

>NTDB_id=619759 NW973_RS00120 WP_258410895.1 29975..30775(+) (vicX) [Staphylococcus aureus strain 03-RR-88]
MSRLIRMSVLASGSTGNATFVENEKGSLIVDVGLTGKKMEELFSQIDRNIQDLNGILVTHEHIDHIKGLGVLARKYQLPI
YANEKTWQAIEKKDSRIPMDQKFIFNPYETKSIAGFDVESFNVSHDAIDPQFYIFHNNYKKFTILTDTGYVSDRMKGMIR
GSDAFIFESNHDVDMLRMCRYPWKTKQRILGDMGHVSNEDAGHAMTDVITGNTKRIYLSHLSQDNNMKDLARMSVGQVLN
EHDIDTEKEVLLCDTDKAIPTSIYTI

Nucleotide


Download         Length: 801 bp        

>NTDB_id=619759 NW973_RS00120 WP_258410895.1 29975..30775(+) (vicX) [Staphylococcus aureus strain 03-RR-88]
ATGAGCCGCTTGATACGCATGAGTGTATTAGCAAGTGGTAGTACAGGTAACGCCACTTTTGTAGAAAATGAAAAAGGTAG
TCTAATAGTTGATGTTGGTTTGACGGGCAAGAAAATGGAAGAATTGTTTAGTCAAATTGATCGTAATATTCAAGATTTAA
ATGGTATTTTAGTAACCCATGAACATATTGACCATATTAAAGGGTTAGGTGTTTTGGCGCGTAAATATCAATTGCCAATT
TATGCGAATGAAAAGACTTGGCAGGCAATTGAAAAGAAAGATAGTCGCATCCCTATGGATCAGAAATTCATTTTTAATCC
TTATGAAACAAAATCTATTGCAGGTTTCGATGTTGAATCGTTTAACGTGTCACATGATGCAATAGATCCGCAATTTTATA
TTTTCCATAATAACTATAAGAAGTTTACGATTTTAACGGATACGGGTTACGTGTCTGATCGTATGAAAGGTATGATACGT
GGCAGCGATGCGTTTATTTTTGAGAGTAATCATGACGTCGATATGTTGAGAATGTGTCGTTATCCATGGAAGACGAAACA
ACGTATTTTAGGCGATATGGGTCATGTATCTAATGAGGATGCGGGTCATGCGATGACAGACGTGATTACAGGTAACACGA
AACGTATTTACTTATCGCATTTATCACAAGATAATAATATGAAAGATTTGGCGCGTATGAGTGTTGGTCAAGTATTGAAC
GAACACGATATTGATACGGAAAAAGAAGTATTGCTATGTGATACGGATAAAGCTATTCCAACGTCAATATATACAATATA
A

Domains

Predicted by InterProScan.

Metallo-beta-lactamase superfamily (Lactamase_B)

(14-220)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  vicX Streptococcus mutans UA159

48.263

97.368

0.47