Detailed information    

insolico Bioinformatically predicted

Overview

Name   recX   Type   Regulator
Locus tag   LIS76_RS03530 Genome accession   NZ_CP085717
Coordinates   708724..709524 (+) Length   266 a.a.
NCBI ID   WP_353738284.1    Uniprot ID   -
Organism   Peribacillus asahii strain CMF4     
Function   inhibit excessive RecA-mediated recombination (predicted from homology)   
Competence regulation

Genomic Context

Location: 703724..714524
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  LIS76_RS03500 (LIS76_03505) - 704789..705160 (-) 372 WP_252292955.1 hypothetical protein -
  LIS76_RS03505 (LIS76_03510) - 705334..706233 (-) 900 WP_252292956.1 LysR family transcriptional regulator -
  LIS76_RS03510 (LIS76_03515) - 706520..706708 (+) 189 WP_127759074.1 hypothetical protein -
  LIS76_RS03515 (LIS76_03520) - 707182..707364 (-) 183 WP_252288974.1 YfhD family protein -
  LIS76_RS03520 (LIS76_03525) - 707395..707520 (-) 126 WP_127759076.1 YfhE family protein -
  LIS76_RS03525 (LIS76_03530) - 707711..708616 (-) 906 WP_252292958.1 TIGR01777 family oxidoreductase -
  LIS76_RS03530 (LIS76_03535) recX 708724..709524 (+) 801 WP_353738284.1 recombination regulator RecX Regulator
  LIS76_RS03535 (LIS76_03540) - 709594..709905 (+) 312 WP_252288977.1 YfhH family protein -
  LIS76_RS03540 (LIS76_03545) - 709948..710085 (-) 138 WP_127759079.1 YpzG family protein -
  LIS76_RS03545 (LIS76_03550) - 710107..710262 (-) 156 WP_252292961.1 small, acid-soluble spore protein K -
  LIS76_RS03550 (LIS76_03555) - 710374..710640 (+) 267 WP_252292963.1 YfhJ family protein -
  LIS76_RS03555 (LIS76_03560) - 710803..711780 (-) 978 WP_252292965.1 metal-dependent hydrolase -
  LIS76_RS03560 (LIS76_03565) mutY 711992..713110 (+) 1119 WP_252292966.1 A/G-specific adenine glycosylase -
  LIS76_RS03565 (LIS76_03570) - 713178..713402 (-) 225 WP_119118824.1 hypothetical protein -
  LIS76_RS03570 (LIS76_03575) fabL 713475..714224 (+) 750 WP_252292968.1 enoyl-[acyl-carrier-protein] reductase FabL -

Sequence

Protein


Download         Length: 266 a.a.        Molecular weight: 31395.09 Da        Isoelectric Point: 8.5937

>NTDB_id=619565 LIS76_RS03530 WP_353738284.1 708724..709524(+) (recX) [Peribacillus asahii strain CMF4]
MMPTITKITTQTKRTDRYNIFIDEKYSFSVDEDVLLKFQLKKGKEIDALLLSQIQFHDNIQKSFTDALGYLSYRMRSEAE
IRLYLKQKGIEEPIIHETIHRLYQYNYLNDLDFAKAYVRTHVNGGNKGPVVLQRELKEKGISDPLIQQALLEYPFDVQID
HAKHLANKSIKKEKAISERALQQKLEHMLSRKGFSRDVIVIALEGVTIEKDEQEEWHSLCYQAEKIIRRYRAYEGFLFQQ
KVKQALFRKGFSLELIERYLNELEGE

Nucleotide


Download         Length: 801 bp        

>NTDB_id=619565 LIS76_RS03530 WP_353738284.1 708724..709524(+) (recX) [Peribacillus asahii strain CMF4]
ATGATGCCAACAATTACGAAAATAACCACTCAAACAAAGCGAACGGATCGCTATAATATCTTTATAGATGAAAAGTATTC
GTTTAGTGTTGATGAGGATGTTCTGTTAAAATTCCAATTAAAAAAAGGAAAAGAAATTGATGCGTTATTATTAAGTCAAA
TTCAATTTCATGATAATATTCAAAAATCGTTTACAGATGCTTTAGGATATTTATCGTACCGCATGCGCTCTGAAGCGGAG
ATCCGTTTATATTTAAAGCAGAAAGGAATTGAAGAGCCAATTATTCATGAAACGATTCATAGGCTTTATCAATATAATTA
TTTAAATGATTTAGACTTTGCTAAAGCTTATGTACGAACGCATGTGAATGGCGGCAATAAAGGACCGGTTGTGCTTCAGC
GCGAGTTAAAGGAAAAGGGGATTAGTGATCCATTGATTCAACAAGCGCTTCTGGAATATCCCTTTGATGTGCAAATTGAT
CATGCTAAGCATTTAGCTAATAAATCAATCAAAAAGGAAAAAGCTATTTCAGAACGGGCTTTACAACAAAAGCTTGAGCA
TATGTTAAGCCGTAAAGGGTTTTCGCGCGATGTAATTGTCATTGCCCTAGAAGGCGTAACGATTGAAAAGGATGAGCAGG
AAGAGTGGCATTCTTTATGCTATCAGGCGGAAAAAATCATTCGTCGCTACCGCGCTTATGAAGGTTTTTTATTTCAACAA
AAAGTTAAGCAAGCATTATTCCGCAAAGGGTTTTCACTTGAATTAATTGAGCGTTATTTAAACGAATTAGAAGGCGAGTA
A

Domains

Predicted by InterproScan.

RecX family (RecX_HTH2)

(85-204)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  recX Bacillus subtilis subsp. subtilis str. 168

51.331

98.872

0.508