Detailed information    

insolico Bioinformatically predicted

Overview

Name   recX   Type   Regulator
Locus tag   LIT37_RS03870 Genome accession   NZ_CP085714
Coordinates   766720..767520 (+) Length   266 a.a.
NCBI ID   WP_353739043.1    Uniprot ID   -
Organism   Peribacillus asahii strain CK1     
Function   inhibit excessive RecA-mediated recombination (predicted from homology)   
Competence regulation

Genomic Context

Location: 761720..772520
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  LIT37_RS03840 (LIT37_03840) - 762786..763157 (-) 372 WP_252288971.1 hypothetical protein -
  LIT37_RS03845 (LIT37_03845) - 763331..764230 (-) 900 WP_252288972.1 LysR family transcriptional regulator -
  LIT37_RS03850 (LIT37_03850) - 764519..764707 (+) 189 WP_252288973.1 hypothetical protein -
  LIT37_RS03855 (LIT37_03855) - 765178..765360 (-) 183 WP_252288974.1 YfhD family protein -
  LIT37_RS03860 (LIT37_03860) - 765391..765516 (-) 126 WP_252288975.1 YfhE family protein -
  LIT37_RS03865 (LIT37_03865) - 765707..766612 (-) 906 WP_252288976.1 TIGR01777 family oxidoreductase -
  LIT37_RS03870 (LIT37_03870) recX 766720..767520 (+) 801 WP_353739043.1 recombination regulator RecX Regulator
  LIT37_RS03875 (LIT37_03875) - 767590..767901 (+) 312 WP_252288977.1 YfhH family protein -
  LIT37_RS03880 (LIT37_03880) - 767966..768103 (-) 138 WP_252288978.1 YpzG family protein -
  LIT37_RS03885 (LIT37_03885) - 768127..768282 (-) 156 WP_252288979.1 small, acid-soluble spore protein K -
  LIT37_RS03890 (LIT37_03890) - 768394..768660 (+) 267 WP_252288980.1 YfhJ family protein -
  LIT37_RS03895 (LIT37_03895) - 768806..769783 (-) 978 WP_252288981.1 metal-dependent hydrolase -
  LIT37_RS03900 (LIT37_03900) mutY 769992..771110 (+) 1119 WP_252288982.1 A/G-specific adenine glycosylase -
  LIT37_RS03905 (LIT37_03905) - 771178..771402 (-) 225 WP_119118824.1 hypothetical protein -
  LIT37_RS03910 (LIT37_03910) fabL 771475..772224 (+) 750 WP_127759085.1 enoyl-[acyl-carrier-protein] reductase FabL -

Sequence

Protein


Download         Length: 266 a.a.        Molecular weight: 31358.06 Da        Isoelectric Point: 8.0400

>NTDB_id=619519 LIT37_RS03870 WP_353739043.1 766720..767520(+) (recX) [Peribacillus asahii strain CK1]
MMPTITKITTQTKRTDRYNIFIDEKYSFSVDEDVLLKFQLKKGKEIDALLLSQIQFHDNIQKSFTDALGYLSYRMRSEAE
IRLYLKQKGIEEPIIHETIHRLYQYNYLNDLDFAKAYVRTHVNGGNKGPVVLQRELKEKGISDPLIQQALLEYPFDVQID
HAKHLANKSIKKEKAISERALLQKLEHMLSRKGFSRDVIVIALEGVTIEKDEQEEWDSLCYQAEKIIRRYRAYEGFLFQQ
KVKQALFRKGFSLELIERYLNELEGE

Nucleotide


Download         Length: 801 bp        

>NTDB_id=619519 LIT37_RS03870 WP_353739043.1 766720..767520(+) (recX) [Peribacillus asahii strain CK1]
ATGATGCCAACAATTACGAAAATAACCACTCAAACAAAGCGAACGGATCGCTATAATATCTTTATAGATGAAAAGTATTC
GTTTAGTGTTGATGAGGATGTTCTGTTAAAGTTTCAATTAAAAAAAGGAAAAGAAATTGATGCGTTATTATTAAGTCAAA
TCCAATTTCATGATAATATTCAAAAATCGTTTACAGATGCTTTAGGATATTTATCGTACCGCATGCGCTCTGAAGCGGAG
ATCCGTTTATATTTAAAGCAGAAAGGAATTGAAGAGCCAATTATTCATGAAACGATTCATAGGCTCTATCAATATAATTA
TTTAAATGATTTAGACTTTGCTAAAGCCTATGTGCGAACGCATGTGAATGGCGGTAATAAAGGGCCGGTTGTGCTTCAGC
GTGAGTTAAAGGAAAAGGGGATTAGTGATCCATTGATTCAACAAGCACTTCTGGAATATCCTTTTGATGTGCAAATTGAC
CATGCTAAACATTTAGCTAATAAATCAATCAAAAAGGAAAAAGCTATTTCAGAACGGGCTTTGCTGCAAAAGCTTGAGCA
TATGTTAAGCCGCAAAGGGTTTTCGCGCGATGTGATTGTCATTGCCCTAGAAGGTGTAACGATTGAAAAAGATGAGCAAG
AAGAGTGGGATTCTTTATGCTATCAGGCAGAAAAAATCATTCGTCGCTACCGCGCTTATGAAGGTTTTTTATTTCAACAA
AAAGTTAAGCAAGCATTATTCCGCAAAGGGTTTTCACTTGAATTAATTGAGCGTTATTTAAACGAATTAGAAGGCGAGTA
A

Domains

Predicted by InterproScan.

RecX family (RecX_HTH2)

(85-204)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  recX Bacillus subtilis subsp. subtilis str. 168

51.331

98.872

0.508