Detailed information    

insolico Bioinformatically predicted

Overview

Name   dinR/lexA   Type   Regulator
Locus tag   NW959_RS06195 Genome accession   NZ_CP102957
Coordinates   1291873..1292496 (-) Length   207 a.a.
NCBI ID   WP_001208755.1    Uniprot ID   P65819
Organism   Staphylococcus aureus strain 18-H-62     
Function   repressor of recA; repressor of dinR (predicted from homology)   
Homologous recombination

Genomic Context

Location: 1286873..1297496
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  NW959_RS06170 (NW959_06170) rpmG 1288448..1288597 (+) 150 WP_001265708.1 50S ribosomal protein L33 -
  NW959_RS06175 (NW959_06175) rpsN 1289052..1289321 (+) 270 WP_001085655.1 30S ribosomal protein S14 -
  NW959_RS06180 (NW959_06180) guaC 1289478..1290455 (+) 978 WP_258411657.1 GMP reductase -
  NW959_RS06190 (NW959_06190) - 1290477..1291493 (+) 1017 WP_289622947.1 CAP domain-containing protein -
  NW959_RS06195 (NW959_06195) dinR/lexA 1291873..1292496 (-) 624 WP_001208755.1 transcriptional repressor LexA Regulator
  NW959_RS06200 (NW959_06200) sosA 1292639..1292872 (+) 234 WP_000499651.1 DNA damage-induced cell division inhibitor SosA -
  NW959_RS06205 (NW959_06205) - 1293008..1293247 (+) 240 WP_000071351.1 DUF896 domain-containing protein -
  NW959_RS06210 (NW959_06210) recP/tkt 1293368..1295356 (+) 1989 WP_258411658.1 transketolase Machinery gene
  NW959_RS06215 (NW959_06215) - 1295634..1295876 (+) 243 WP_000246909.1 YneF family protein -
  NW959_RS06220 (NW959_06220) - 1295863..1295961 (+) 99 WP_258411659.1 hypothetical protein -
  NW959_RS06225 (NW959_06225) - 1296055..1296522 (+) 468 WP_000966142.1 CcdC family protein -

Sequence

Protein


Download         Length: 207 a.a.        Molecular weight: 23331.55 Da        Isoelectric Point: 4.8811

>NTDB_id=619447 NW959_RS06195 WP_001208755.1 1291873..1292496(-) (dinR/lexA) [Staphylococcus aureus strain 18-H-62]
MRELTKRQSEIYNYIKQVVQMKGYPPSVREIGEAVGLASSSTVHGHLSRLEEKGYIRRDPTKPRAIEIVSDQTNDNINME
ETIHVPVIGKVTAGVPITAVENIEEYFPLPEHLTSTHNSDIFILNVVGDSMIEAGILDGDKVIVRSQTIAENGDIIVAMT
EEDEATVKRFYKEKNRYRLQPENSTMEPIYLDNVAVIGKVIGLYREM

Nucleotide


Download         Length: 624 bp        

>NTDB_id=619447 NW959_RS06195 WP_001208755.1 1291873..1292496(-) (dinR/lexA) [Staphylococcus aureus strain 18-H-62]
ATGAGAGAATTAACAAAACGACAAAGCGAAATATATAACTATATTAAACAAGTTGTTCAAATGAAAGGTTATCCGCCTAG
TGTTCGCGAAATTGGTGAAGCAGTTGGCTTAGCATCCAGTTCAACTGTTCATGGTCACCTTTCACGTCTTGAAGAAAAAG
GATATATAAGAAGAGATCCAACGAAACCACGTGCTATAGAAATTGTAAGTGATCAAACAAATGATAATATTAATATGGAA
GAAACGATTCATGTGCCAGTTATTGGTAAAGTCACAGCAGGTGTTCCTATTACCGCTGTAGAAAATATTGAAGAGTATTT
TCCATTACCTGAACACTTAACATCGACACACAATAGCGACATATTCATATTAAACGTCGTAGGCGACAGTATGATTGAGG
CTGGTATATTAGACGGAGACAAAGTAATTGTTCGCAGTCAAACCATAGCAGAAAATGGAGACATTATTGTTGCTATGACT
GAGGAAGATGAAGCAACTGTCAAACGCTTCTATAAAGAAAAAAATCGTTATCGATTACAACCTGAAAATAGTACAATGGA
GCCAATTTACCTCGACAATGTTGCTGTAATTGGGAAAGTAATTGGTTTGTACCGCGAAATGTAA

Domains

Predicted by InterProScan.

LexA DNA binding domain (LexA_DNA_bind)

(1-65)

Peptidase S24-like (Peptidase_S24)

(86-201)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB P65819

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  dinR/lexA Bacillus subtilis subsp. subtilis str. 168

66.341

99.034

0.657