Detailed information    

insolico Bioinformatically predicted

Overview

Name   pilG   Type   Regulator
Locus tag   LJX93_RS24745 Genome accession   NZ_CP085704
Coordinates   5452740..5453141 (-) Length   133 a.a.
NCBI ID   WP_033701912.1    Uniprot ID   A0A6L6TFN9
Organism   Pseudomonas sp. HN2-3     
Function   regulation of type IV pilus assembly (predicted from homology)   
Competence regulation

Genomic Context

Location: 5447740..5458141
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  LJX93_RS24730 (LJX93_24730) - 5449705..5451729 (-) 2025 WP_156310511.1 methyl-accepting chemotaxis protein -
  LJX93_RS24735 (LJX93_24735) - 5451777..5452331 (-) 555 WP_033701910.1 chemotaxis protein CheW -
  LJX93_RS24740 (LJX93_24740) pilH 5452328..5452693 (-) 366 WP_033701911.1 twitching motility response regulator PilH -
  LJX93_RS24745 (LJX93_24745) pilG 5452740..5453141 (-) 402 WP_033701912.1 response regulator Regulator
  LJX93_RS24750 (LJX93_24750) gshB 5453383..5454336 (+) 954 WP_033701913.1 glutathione synthase -
  LJX93_RS24755 (LJX93_24755) - 5454428..5455333 (+) 906 WP_033701914.1 energy transducer TonB -
  LJX93_RS24760 (LJX93_24760) - 5455423..5455992 (+) 570 WP_033701915.1 YqgE/AlgH family protein -
  LJX93_RS24765 (LJX93_24765) ruvX 5455992..5456417 (+) 426 WP_033701916.1 Holliday junction resolvase RuvX -
  LJX93_RS24770 (LJX93_24770) pyrR 5456464..5456982 (+) 519 WP_033701917.1 bifunctional pyr operon transcriptional regulator/uracil phosphoribosyltransferase PyrR -
  LJX93_RS24775 (LJX93_24775) - 5456995..5457999 (+) 1005 WP_033701918.1 aspartate carbamoyltransferase catalytic subunit -

Sequence

Protein


Download         Length: 133 a.a.        Molecular weight: 14770.02 Da        Isoelectric Point: 6.3259

>NTDB_id=619378 LJX93_RS24745 WP_033701912.1 5452740..5453141(-) (pilG) [Pseudomonas sp. HN2-3]
MEQPLKVMVIDDSRTIRRTAQMLLGEAGCEVITASDGFDALSKIVDHQPQIIFVDVLMPRLDGYQTCAVIKHNSAFKDIP
VILLSSRDGLFDKARGRVVGSDQFLTKPFSKEELLDAIRAHVPGFAEHQQHAP

Nucleotide


Download         Length: 402 bp        

>NTDB_id=619378 LJX93_RS24745 WP_033701912.1 5452740..5453141(-) (pilG) [Pseudomonas sp. HN2-3]
ATGGAACAACCCCTGAAGGTGATGGTGATCGACGACTCACGCACGATCCGCCGTACCGCGCAGATGTTGCTCGGCGAAGC
GGGTTGCGAGGTGATTACCGCCAGCGATGGCTTCGATGCCCTGTCCAAGATCGTCGACCACCAGCCACAGATCATCTTCG
TCGATGTGCTGATGCCGCGCCTGGACGGTTACCAGACCTGCGCCGTGATCAAGCACAACAGTGCCTTCAAGGACATACCG
GTGATTCTCCTGTCGTCGCGCGACGGCCTGTTCGACAAGGCCCGCGGGCGGGTGGTGGGGTCCGACCAGTTCCTCACCAA
GCCGTTCAGCAAGGAAGAACTGCTCGATGCGATCAGGGCCCATGTGCCCGGTTTTGCCGAACACCAACAACACGCACCCT
GA

Domains

Predicted by InterproScan.

Response regulator receiver domain (Response_reg)

(7-119)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A6L6TFN9

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilG Acinetobacter baumannii strain A118

71.667

90.226

0.647