Detailed information    

insolico Bioinformatically predicted

Overview


Name   htrA   Type   Regulator
Locus tag   NW951_RS08245 Genome accession   NZ_CP102954
Coordinates   1731132..1732406 (+) Length   424 a.a.
NCBI ID   WP_258413041.1    Uniprot ID   -
Organism   Staphylococcus aureus strain 30-P-10     
Function   require for competence development (predicted from homology)   
Competence regulation

Genomic Context


Location: 1726132..1737406
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  NW951_RS08225 (NW951_08225) - 1727456..1727551 (+) 96 WP_031761395.1 hypothetical protein -
  NW951_RS08230 (NW951_08230) - 1727512..1728642 (-) 1131 WP_000721707.1 HAD family hydrolase -
  NW951_RS08235 (NW951_08235) nagE 1728749..1730215 (-) 1467 WP_000276367.1 N-acetylglucosamine-specific PTS transporter subunit IIBC -
  NW951_RS08240 (NW951_08240) - 1730343..1730960 (-) 618 WP_000287588.1 1-acyl-sn-glycerol-3-phosphate acyltransferase -
  NW951_RS08245 (NW951_08245) htrA 1731132..1732406 (+) 1275 WP_258413041.1 trypsin-like peptidase domain-containing protein Regulator
  NW951_RS08250 (NW951_08250) tyrS 1732500..1733762 (-) 1263 WP_000186029.1 tyrosine--tRNA ligase -
  NW951_RS08255 (NW951_08255) - 1734143..1735048 (+) 906 WP_000184370.1 transglycosylase domain-containing protein -
  NW951_RS08260 (NW951_08260) - 1735028..1735120 (-) 93 WP_001789987.1 hypothetical protein -

Sequence


Protein


Download         Length: 424 a.a.        Molecular weight: 45802.94 Da        Isoelectric Point: 9.9050

>NTDB_id=619206 NW951_RS08245 WP_258413041.1 1731132..1732406(+) (htrA) [Staphylococcus aureus strain 30-P-10]
MSDFNHTNHSTTNHSQTPRYRRPKFPWFKTVIVALIAGIIGALLVLGIGKVLNSTILNKDGSTVQTTNNKGGNQLDGQSK
KFGTVHEMIKSVSPTIVGVINMQKASSVDDLLKGKSSKPSEAGVGSGVIYQINNNSAYIVTNNHVIDGANEIRVQLHNKK
QVKAKLVGKDAVTDIAVLKIENTKGIKAIQFANSSKVQTGDSVFAMGNPLGLQFANSVTSGIISASERTIDAETTGGNTK
VSVLQTDAAINPGNSGGALVDINGNLVGINSMKIAATQVEGIGFAIPSNEVKVTIEQLVKHGKIDRPSIGIGLINLKDIP
EEEREQLHTDREDGIYVAKADSDIDLKKGDIITEIDGKKIKDDVDLRSYLYENKKPGESVTVTVIRDGKTKEVKVKLKQQ
EEQPKRQSRSERQSPGQGDRDFFR

Nucleotide


Download         Length: 1275 bp        

>NTDB_id=619206 NW951_RS08245 WP_258413041.1 1731132..1732406(+) (htrA) [Staphylococcus aureus strain 30-P-10]
ATGTCAGATTTTAATCATACAAATCATTCTACAACAAACCATAGCCAAACACCTAGATACAGAAGACCTAAATTTCCATG
GTTTAAAACAGTCATCGTTGCATTGATTGCTGGAATTATTGGTGCACTTCTAGTACTTGGTATAGGCAAAGTATTAAATA
GTACAATTTTAAATAAAGATGGTTCAACTGTTCAGACAACAAATAATAAAGGTGGCAATCAATTAGACGGTCAAAGCAAG
AAATTCGGTACCGTTCATGAAATGATAAAATCTGTCTCCCCTACAATTGTTGGAGTTATTAACATGCAAAAAGCATCAAG
TGTAGACGACTTATTAAAAGGCAAATCATCTAAACCATCTGAAGCTGGAGTAGGTTCAGGTGTTATCTATCAAATAAACA
ACAATTCAGCTTATATCGTTACAAACAATCATGTTATTGATGGCGCAAATGAAATTAGAGTCCAATTACATAATAAAAAA
CAAGTTAAAGCGAAATTAGTTGGTAAAGATGCAGTAACTGATATTGCTGTACTTAAAATTGAAAATACAAAAGGTATTAA
AGCGATTCAATTTGCCAACTCTTCAAAAGTACAAACTGGCGATAGCGTATTCGCAATGGGTAACCCATTAGGATTACAAT
TTGCTAACTCTGTAACATCTGGTATCATTTCAGCAAGCGAACGTACGATTGACGCTGAGACAACTGGTGGCAATACAAAA
GTTAGCGTTCTTCAAACAGATGCTGCTATTAACCCAGGTAATTCAGGTGGCGCATTAGTAGATATTAATGGTAATTTAGT
TGGTATTAACTCAATGAAAATTGCTGCGACACAAGTTGAAGGTATCGGGTTTGCTATTCCAAGTAATGAAGTTAAAGTAA
CAATTGAACAACTTGTAAAACATGGTAAAATTGACCGCCCTTCGATTGGTATTGGTTTAATTAATTTGAAAGATATTCCT
GAAGAAGAGCGCGAGCAACTTCATACTGATAGAGAAGACGGTATTTATGTCGCCAAAGCTGATAGTGATATTGATCTTAA
AAAAGGTGATATTATTACAGAAATTGATGGCAAGAAAATTAAAGATGATGTTGATTTAAGAAGCTATTTATATGAAAATA
AAAAACCTGGTGAATCAGTCACTGTTACCGTTATCCGTGATGGTAAAACAAAAGAAGTTAAAGTGAAATTAAAACAACAA
GAAGAACAACCAAAACGTCAAAGCCGATCAGAACGTCAATCACCTGGCCAAGGCGATAGAGATTTCTTTAGATAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  htrA Streptococcus mutans UA159

38.806

94.811

0.368