Detailed information    

insolico Bioinformatically predicted

Overview

Name   vicX   Type   Regulator
Locus tag   NW951_RS00120 Genome accession   NZ_CP102954
Coordinates   29975..30775 (+) Length   266 a.a.
NCBI ID   WP_000088649.1    Uniprot ID   A0A7U7JRT9
Organism   Staphylococcus aureus strain 30-P-10     
Function   require for competence development (predicted from homology)   
Competence regulation

Genomic Context

Location: 24975..35775
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  NW951_RS00105 (NW951_00105) walK 25637..27463 (+) 1827 WP_000871607.1 cell wall metabolism sensor histidine kinase WalK -
  NW951_RS00110 (NW951_00110) yycH 27456..28790 (+) 1335 WP_001060140.1 two-component system activity regulator YycH -
  NW951_RS00115 (NW951_00115) yycI 28791..29579 (+) 789 WP_001104175.1 two-component system regulatory protein YycI -
  NW951_RS00120 (NW951_00120) vicX 29975..30775 (+) 801 WP_000088649.1 MBL fold metallo-hydrolase Regulator
  NW951_RS00125 (NW951_00125) adsA 31002..33320 (+) 2319 WP_258413192.1 LPXTG-anchored adenosine synthase AdsA -
  NW951_RS00130 (NW951_00130) rlmH 33687..34166 (+) 480 WP_000704777.1 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH -
  NW951_RS00135 (NW951_00135) - 34371..34505 (-) 135 WP_001790628.1 hypothetical protein -
  NW951_RS00140 (NW951_00140) - 34469..34561 (+) 93 WP_001790000.1 hypothetical protein -

Sequence

Protein


Download         Length: 266 a.a.        Molecular weight: 30313.52 Da        Isoelectric Point: 6.3392

>NTDB_id=619141 NW951_RS00120 WP_000088649.1 29975..30775(+) (vicX) [Staphylococcus aureus strain 30-P-10]
MSRLIRMSVLASGSTGNATFVENEKGSLLVDVGLTGKKMEELFSQIDRNIQDLNGILVTHEHIDHIKGLGVLARKYQLPI
YANEKTWQAIEKKDSRIPMDQKFIFNPYETKSIAGFDVESFNVSHDAIDPQFYIFHNNYKKFTILTDTGYVSDRMKGMIR
GSDAFIFESNHDVDMLRMCRYPWKTKQRILGDMGHVSNEDAGHAMTDVITGNTKRIYLSHLSQDNNMKDLARMSVGQVLN
EHDIDTEKEVLLCDTDKAIPTPIYTI

Nucleotide


Download         Length: 801 bp        

>NTDB_id=619141 NW951_RS00120 WP_000088649.1 29975..30775(+) (vicX) [Staphylococcus aureus strain 30-P-10]
ATGAGCCGCTTGATACGCATGAGTGTATTAGCAAGTGGTAGTACAGGTAACGCCACTTTTGTAGAAAATGAAAAAGGTAG
TCTATTAGTTGATGTTGGTTTGACTGGCAAGAAAATGGAAGAATTGTTTAGTCAAATTGACCGTAATATTCAAGATTTAA
ATGGTATTTTAGTAACCCATGAACATATTGATCATATTAAAGGATTAGGTGTTTTGGCGCGTAAATATCAATTGCCAATT
TATGCGAATGAAAAGACTTGGCAGGCAATTGAAAAGAAAGATAGTCGCATCCCTATGGATCAGAAATTCATTTTTAATCC
TTATGAAACAAAATCTATTGCAGGTTTCGATGTTGAATCGTTTAACGTGTCACATGATGCAATAGATCCGCAATTTTATA
TTTTCCATAATAACTATAAGAAGTTTACGATTTTAACGGATACGGGTTACGTGTCTGATCGTATGAAAGGTATGATACGT
GGCAGCGATGCGTTTATTTTTGAGAGTAATCATGACGTCGATATGTTGAGAATGTGTCGTTATCCATGGAAGACGAAACA
ACGTATTTTAGGCGATATGGGTCATGTATCTAATGAGGATGCGGGTCATGCAATGACAGACGTGATTACAGGCAACACGA
AACGTATTTACTTATCACATTTATCACAAGATAATAACATGAAAGATTTGGCGCGTATGAGTGTTGGTCAAGTATTGAAC
GAACACGATATTGATACGGAAAAAGAAGTATTGCTATGTGATACGGATAAAGCTATTCCAACGCCAATATATACAATATA
A

Domains

Predicted by InterProScan.

Metallo-beta-lactamase superfamily (Lactamase_B)

(14-220)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A7U7JRT9

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  vicX Streptococcus mutans UA159

49.027

96.617

0.474