Detailed information    

insolico Bioinformatically predicted

Overview

Name   vicX   Type   Regulator
Locus tag   NW967_RS00130 Genome accession   NZ_CP102952
Coordinates   32606..33406 (+) Length   266 a.a.
NCBI ID   WP_000088649.1    Uniprot ID   A0A7U7JRT9
Organism   Staphylococcus aureus strain 39-B-49     
Function   require for competence development (predicted from homology)   
Competence regulation

Genomic Context

Location: 27606..38406
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  NW967_RS00115 (NW967_00115) walK 28268..30094 (+) 1827 WP_000871607.1 cell wall metabolism sensor histidine kinase WalK -
  NW967_RS00120 (NW967_00120) yycH 30087..31421 (+) 1335 WP_001060140.1 two-component system activity regulator YycH -
  NW967_RS00125 (NW967_00125) yycI 31422..32210 (+) 789 WP_258411424.1 two-component system regulatory protein YycI -
  NW967_RS00130 (NW967_00130) vicX 32606..33406 (+) 801 WP_000088649.1 MBL fold metallo-hydrolase Regulator
  NW967_RS00135 (NW967_00135) adsA 33633..35951 (+) 2319 WP_258411425.1 LPXTG-anchored adenosine synthase AdsA -
  NW967_RS00140 (NW967_00140) rlmH 36319..36798 (+) 480 WP_000704775.1 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH -
  NW967_RS00145 (NW967_00145) - 36842..37879 (+) 1038 WP_258411426.1 SIR2 family protein -
  NW967_RS00150 (NW967_00150) - 37852..38151 (+) 300 WP_258411427.1 hypothetical protein -

Sequence

Protein


Download         Length: 266 a.a.        Molecular weight: 30313.52 Da        Isoelectric Point: 6.3392

>NTDB_id=618962 NW967_RS00130 WP_000088649.1 32606..33406(+) (vicX) [Staphylococcus aureus strain 39-B-49]
MSRLIRMSVLASGSTGNATFVENEKGSLLVDVGLTGKKMEELFSQIDRNIQDLNGILVTHEHIDHIKGLGVLARKYQLPI
YANEKTWQAIEKKDSRIPMDQKFIFNPYETKSIAGFDVESFNVSHDAIDPQFYIFHNNYKKFTILTDTGYVSDRMKGMIR
GSDAFIFESNHDVDMLRMCRYPWKTKQRILGDMGHVSNEDAGHAMTDVITGNTKRIYLSHLSQDNNMKDLARMSVGQVLN
EHDIDTEKEVLLCDTDKAIPTPIYTI

Nucleotide


Download         Length: 801 bp        

>NTDB_id=618962 NW967_RS00130 WP_000088649.1 32606..33406(+) (vicX) [Staphylococcus aureus strain 39-B-49]
ATGAGCCGCTTGATACGCATGAGTGTATTAGCAAGTGGTAGTACAGGTAACGCCACTTTTGTAGAGAATGAAAAAGGTAG
TCTATTAGTTGATGTTGGTTTGACTGGCAAGAAAATGGAAGAATTGTTTAGTCAAATTGACCGTAATATTCAAGATTTAA
ATGGTATTTTAGTAACCCATGAACATATTGATCATATTAAAGGATTAGGTGTTTTGGCGCGTAAATATCAATTGCCAATT
TATGCGAATGAAAAGACTTGGCAGGCAATTGAAAAGAAAGATAGTCGCATCCCTATGGATCAGAAATTCATTTTTAATCC
TTATGAAACGAAATCTATTGCAGGTTTCGATGTTGAATCGTTTAACGTGTCACATGATGCAATAGATCCGCAATTTTATA
TTTTCCATAATAACTATAAGAAGTTTACGATTTTAACAGATACGGGTTACGTGTCTGATCGTATGAAAGGTATGATACGT
GGCAGCGATGCGTTTATTTTTGAGAGTAATCATGACGTCGATATGTTGAGAATGTGTCGTTATCCATGGAAGACGAAACA
ACGTATTTTAGGCGATATGGGTCATGTATCTAATGAGGATGCGGGTCATGCAATGACAGACGTGATTACAGGTAACACGA
AACGTATTTACTTATCGCATTTATCACAAGATAATAACATGAAAGATTTGGCGCGTATGAGTGTTGGCCAAGTATTGAAC
GAACACGATATTGATACGGAAAAAGAAGTATTGCTATGTGATACGGATAAAGCTATTCCAACGCCAATATATACAATATA
A

Domains

Predicted by InterProScan.

Metallo-beta-lactamase superfamily (Lactamase_B)

(14-220)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A7U7JRT9

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  vicX Streptococcus mutans UA159

49.027

96.617

0.474