Detailed information NTG0618948

Bioinformatically predicted

Overview

• Name: cytR
• Type: Regulator
• Locus tag: NW339_RS23350
• Genome accession: NZ_CP102947
• Coordinates: 4776559..4777584 (+)
• Length: 341 a.a.
• NCBI ID: WP_000644908.1
• Uniprot ID: -
• Organism: Escherichia coli strain SCAID WND1-2022 (119)
• Function: promote competence gene expression (predicted from homology) Competence regulation

Genomic Context

Location: 4771559..4782584

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
NW339_RS23330 (NW339_23330)	metJ	4772744..4773061 (+)	318	WP_000852812.1	met regulon transcriptional regulator MetJ	-
NW339_RS23335 (NW339_23335)	yiiX	4773121..4773729 (+)	609	WP_000702314.1	YiiX family permuted papain-like enzyme	-
NW339_RS23340 (NW339_23340)	rpmE	4773790..4774002 (-)	213	WP_000710769.1	50S ribosomal protein L31	-
NW339_RS23345 (NW339_23345)	priA	4774205..4776403 (+)	2199	WP_001296625.1	primosomal protein N'	Machinery gene
NW339_RS23350 (NW339_23350)	cytR	4776559..4777584 (+)	1026	WP_000644908.1	DNA-binding transcriptional regulator CytR	Regulator
NW339_RS23355 (NW339_23355)	ftsN	4777676..4778635 (+)	960	WP_000068834.1	cell division protein FtsN	-
NW339_RS23360 (NW339_23360)	hslV	4778728..4779258 (+)	531	WP_000208242.1	ATP-dependent protease subunit HslV	-
NW339_RS23365 (NW339_23365)	hslU	4779268..4780599 (+)	1332	WP_001293344.1	HslU--HslV peptidase ATPase subunit	-
NW339_RS23370 (NW339_23370)	menA	4780666..4781592 (+)	927	WP_001305044.1	1,4-dihydroxy-2-naphthoate polyprenyltransferase	-
NW339_RS23375 (NW339_23375)	rraA	4781685..4782170 (+)	486	WP_000872908.1	ribonuclease E activity regulator RraA	-
NW339_RS23380 (NW339_23380)	zapB	4782255..4782500 (-)	246	WP_001296623.1	septal ring assembly protein ZapB	-

Sequence

Protein

• Length: 341 a.a.
• Molecular weight: 37847.80 Da
• Isoelectric Point: 6.3842

>NTDB_id=618948 NW339_RS23350 WP_000644908.1 4776559..4777584(+) (cytR) [Escherichia coli strain SCAID WND1-2022 (119)]
MKAKKQETAATMKDVALKAKVSTATVSRALMNPDKVSQATRNRVEKAAREVGYLPQPMGRNVKRNESRTILVIVPDICDP
FFSEIIRGIEVTAANHGYLVLIGDCAHQNQQEKTFIDLIITKQIDGMLLLGSRLPFDASIEEQRNLPPMVMANEFAPELE
LPTVHIDNLTAAFDAVNYLYEQGHKRIGCIAGPEEMPLCHYRLQGYVQALRRCGIMVDPQYIARGDFTFEAGSRAMQQLL
DLPQPPTAVFCHSDVMALGALSQAKRQGLKVPEDLSIIGFDNIDLTQFCDPPLTTIAQPRYEIGREAMLLLLDQMQGQHV
GSGSRLMDCELIIRGSTRALP

Nucleotide

• Length: 1026 bp

>NTDB_id=618948 NW339_RS23350 WP_000644908.1 4776559..4777584(+) (cytR) [Escherichia coli strain SCAID WND1-2022 (119)]
GTGAAAGCGAAGAAGCAGGAAACTGCCGCGACCATGAAAGACGTTGCCCTCAAGGCAAAAGTCTCTACAGCGACTGTCTC
CCGAGCATTAATGAATCCCGATAAAGTCTCCCAGGCCACCCGTAATCGGGTTGAAAAAGCGGCCCGGGAAGTGGGTTATT
TACCGCAGCCTATGGGGCGCAACGTCAAGCGTAATGAATCCCGCACCATTCTGGTGATTGTCCCGGATATCTGCGACCCT
TTCTTTAGCGAAATTATTCGCGGTATCGAAGTTACGGCGGCAAATCACGGATATCTGGTGCTGATTGGCGACTGTGCGCA
TCAAAATCAGCAGGAAAAAACCTTTATCGATTTGATCATCACCAAGCAAATTGATGGCATGTTGTTGCTGGGTTCAAGGC
TGCCGTTTGATGCCAGCATTGAGGAACAGCGTAATCTGCCGCCGATGGTGATGGCGAACGAATTTGCACCGGAACTGGAG
CTGCCTACCGTTCATATCGACAATCTGACCGCCGCATTTGATGCAGTAAATTATTTATATGAGCAAGGGCATAAACGGAT
TGGCTGTATAGCCGGTCCCGAAGAGATGCCGCTGTGTCACTACCGCCTGCAAGGCTATGTTCAGGCGCTGCGTCGCTGCG
GCATTATGGTTGATCCGCAATACATCGCCCGTGGCGACTTCACCTTCGAAGCCGGAAGCAGAGCAATGCAACAGCTGCTT
GATCTTCCACAACCGCCTACTGCTGTCTTCTGCCATAGCGATGTGATGGCGCTCGGCGCACTTTCTCAGGCAAAACGTCA
GGGGCTGAAAGTCCCGGAAGACCTTTCCATAATCGGTTTTGATAACATCGACCTGACGCAATTTTGTGATCCGCCGCTGA
CAACCATCGCGCAGCCGCGTTACGAAATCGGTCGGGAAGCTATGCTGTTATTGCTTGATCAAATGCAGGGGCAACACGTT
GGCAGTGGCTCTCGTTTAATGGACTGCGAACTTATCATCCGGGGATCAACACGCGCGTTACCTTAA

Domains

Predicted by InterProScan.

• Periplasmic binding protein-like domain (Peripla_BP_3) (176-337)

• Bacterial regulatory proteins, lacI family (LacI) (11-56)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
cytR	Vibrio parahaemolyticus RIMD 2210633	63.881	98.24	0.628
cytR	Vibrio cholerae C6706	65.138	95.894	0.625