Detailed information NTG0618862

Bioinformatically predicted

Overview

• Name: pilA
• Type: Machinery gene
• Locus tag: LCH97_RS10840
• Genome accession: NZ_CP085530
• Coordinates: 2264261..2265334 (+)
• Length: 357 a.a.
• NCBI ID: WP_227301695.1
• Uniprot ID: -
• Organism: Vogesella sp. XCS3
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 2259261..2270334

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
LCH97_RS10790 (LCH97_10790)	rplK	2259952..2260383 (-)	432	WP_017507387.1	50S ribosomal protein L11	-
LCH97_RS10795 (LCH97_10795)	nusG	2260480..2261013 (-)	534	WP_026107682.1	transcription termination/antitermination protein NusG	-
LCH97_RS10800 (LCH97_10800)	secE	2261016..2261363 (-)	348	WP_370630729.1	preprotein translocase subunit SecE	-
LCH97_RS10810 (LCH97_10810)	tuf	2261519..2262709 (-)	1191	WP_017507378.1	elongation factor Tu	-
LCH97_RS10830 (LCH97_10830)	-	2263183..2263434 (-)	252	WP_017507390.1	YfhL family 4Fe-4S dicluster ferredoxin	-
LCH97_RS10835 (LCH97_10835)	rsmD	2263512..2264063 (-)	552	WP_227301694.1	16S rRNA (guanine(966)-N(2))-methyltransferase RsmD	-
LCH97_RS10840 (LCH97_10840)	pilA	2264261..2265334 (+)	1074	WP_227301695.1	signal recognition particle-docking protein FtsY	Machinery gene
LCH97_RS10845 (LCH97_10845)	ftsE	2265381..2266034 (+)	654	WP_017507393.1	cell division ATP-binding protein FtsE	-
LCH97_RS10850 (LCH97_10850)	ftsX	2266031..2266942 (+)	912	WP_227301696.1	permease-like cell division protein FtsX	-
LCH97_RS10855 (LCH97_10855)	rpoH	2267054..2267914 (+)	861	WP_227301697.1	RNA polymerase sigma factor RpoH	-
LCH97_RS10860 (LCH97_10860)	-	2268013..2269776 (-)	1764	WP_227301698.1	PglL family O-oligosaccharyltransferase	-

Sequence

Protein

• Length: 357 a.a.
• Molecular weight: 37718.50 Da
• Isoelectric Point: 6.1608

>NTDB_id=618862 LCH97_RS10840 WP_227301695.1 2264261..2265334(+) (pilA) [Vogesella sp. XCS3]
MFSFFKKKTPPAETTTTEKVAEPVAIEPSAPIAPPAPEAQADVAVAPHAAAEPPRKASWTERLKAGLSKTRDKLGKQLAT
LFGGGKIDEDLYEELETVLLTADMGVDATNHLLKDVRDRVSLGGLKDASELKGALKSSLGELIGPLEVPLDTAGKKPFVI
MMVGVNGAGKTTSIGKLAKYFQSQGKSVLLAAGDTFRAAAREQLMAWGERNNVTVIAQQSGDAAAVCYDAIQAATARGID
IVLADTAGRLPTQLHLMEEIKKVKRVIQKAIPDGPHEVMLVLDANIGQNAINQVVAFDDALGLTGLVLTKLDGTAKGGVI
AAIAKQRPVPLRFIGVGESIDDLRPFQAGPYIDALFD

Nucleotide

• Length: 1074 bp

>NTDB_id=618862 LCH97_RS10840 WP_227301695.1 2264261..2265334(+) (pilA) [Vogesella sp. XCS3]
ATGTTCAGCTTCTTCAAGAAAAAGACTCCGCCAGCCGAGACCACCACTACCGAGAAGGTAGCGGAACCTGTTGCCATCGA
ACCCAGCGCCCCTATCGCGCCACCAGCACCGGAGGCACAGGCGGATGTTGCAGTCGCCCCCCACGCAGCTGCTGAGCCGC
CACGCAAAGCTAGCTGGACCGAGCGCCTGAAAGCCGGCTTGTCCAAAACCCGCGACAAGCTAGGCAAGCAATTGGCCACG
CTGTTCGGTGGCGGCAAGATCGATGAAGATCTGTACGAAGAGCTGGAAACGGTACTGCTGACCGCCGATATGGGCGTGGA
TGCTACCAACCACCTGCTTAAAGATGTACGTGATCGCGTAAGCCTGGGCGGCCTAAAGGACGCCAGCGAGCTGAAGGGCG
CACTGAAGTCGTCGCTGGGCGAGCTAATCGGCCCGCTGGAAGTGCCACTGGATACCGCAGGCAAGAAACCATTCGTGATC
ATGATGGTGGGCGTGAACGGCGCCGGCAAAACCACGTCTATCGGCAAACTCGCCAAGTACTTCCAGAGCCAGGGCAAGAG
TGTGCTGCTAGCCGCTGGGGATACTTTCCGTGCTGCTGCTCGCGAGCAACTGATGGCCTGGGGTGAGCGCAATAACGTGA
CCGTTATTGCCCAACAGAGCGGTGATGCCGCAGCAGTCTGTTACGACGCCATCCAGGCAGCCACGGCGCGTGGTATTGAT
ATCGTGCTGGCGGATACCGCCGGCCGCCTGCCCACGCAGCTGCACCTGATGGAAGAAATCAAAAAGGTAAAGCGCGTTAT
CCAGAAAGCCATTCCGGATGGCCCGCATGAAGTCATGCTGGTACTGGATGCCAATATCGGCCAGAACGCCATTAACCAGG
TAGTCGCGTTTGATGATGCGCTGGGTCTGACTGGCCTGGTGCTCACCAAGCTGGATGGCACCGCCAAAGGGGGTGTCATT
GCAGCCATCGCCAAGCAGCGCCCGGTACCGCTGCGCTTTATTGGCGTGGGCGAAAGCATCGATGACCTGCGCCCGTTCCA
GGCCGGCCCGTACATCGACGCGCTGTTTGACTAG

Domains

Predicted by InterproScan.

• SRP54-type protein, GTPase domain (SRP54) (157-356)

• SRP54-type protein, helical bundle domain (SRP54_N) (74-139)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilA	Neisseria gonorrhoeae MS11	68.644	99.16	0.681