Detailed information NTG0618696

Bioinformatically predicted

Overview

• Name: comFA
• Type: Machinery gene
• Locus tag: HQG80_RS25000
• Genome accession: NZ_CP085506
• Coordinates: 4864188..4865537 (-)
• Length: 449 a.a.
• NCBI ID: WP_000879431.1
• Uniprot ID: -
• Organism: Bacillus cereus strain HD2.4
• Function: ssDNA transport into the cell (predicted from homology) DNA binding and uptake

Genomic Context

Location: 4859188..4870537

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
HQG80_RS24980 (HQG80_024980)	secA	4859513..4862020 (-)	2508	WP_000579385.1	preprotein translocase subunit SecA	-
HQG80_RS24985 (HQG80_024985)	raiA	4862295..4862837 (-)	543	WP_000671185.1	ribosome-associated translation inhibitor RaiA	-
HQG80_RS24990 (HQG80_024990)	cspC	4863160..4863357 (-)	198	WP_001990088.1	cold shock protein CspC	-
HQG80_RS24995 (HQG80_024995)	-	4863484..4864188 (-)	705	WP_013142274.1	ComF family protein	-
HQG80_RS25000 (HQG80_025000)	comFA	4864188..4865537 (-)	1350	WP_000879431.1	ATP-dependent helicase ComFA	Machinery gene
HQG80_RS25005 (HQG80_025005)	-	4865664..4867109 (-)	1446	WP_000499477.1	C40 family peptidase	-
HQG80_RS25010 (HQG80_025010)	-	4867264..4867578 (-)	315	WP_000400857.1	helix-turn-helix domain-containing protein	-
HQG80_RS25015 (HQG80_025015)	-	4867751..4868593 (-)	843	WP_000684725.1	DegV family protein	-
HQG80_RS25020 (HQG80_025020)	-	4868830..4869465 (+)	636	WP_025686691.1	YigZ family protein	-

Sequence

Protein

• Length: 449 a.a.
• Molecular weight: 51067.91 Da
• Isoelectric Point: 9.8988

>NTDB_id=618696 HQG80_RS25000 WP_000879431.1 4864188..4865537(-) (comFA) [Bacillus cereus strain HD2.4]
MLAGKQLLLEELSSDLQRELNDLKKKGEIVCVQGVKKKNSKYMCQRCGNVDRWLFASFLCKRCSKVCTYCRKCIAMGRVS
ECAVLVRGIAERKREKNSNLLQWNGTLSTGQNLAAQGVIEAIKQKESFFIWAVCGAGKTEMLFYGINEALQKGERVCIAT
PRTDVVLELAPRLQEVFPYIKVAALYGGSVDKEKDAVLVVATTHQLLRYYRAFHVIVVDEIDAFPYCADQMLQYAVKQAM
KEKAARIYLTATPDETWKRKLKQGKQKGVIVSGRYHRHPLPVPLFCWCGNWKKSLNRERIPRVLLQWLKMYLNKKYPVFL
FVPHVRYIEEISSLLKSLHNKVEGVHAEDPMRKEKVAAFRKGEIPLLVTTTILERGVTVKNLQVAVLGAEEEIFSESALV
QIAGRAGRSFEAPYGEVIYFHYGKTEAMVRAKKHIQGMNKNAKEQGLID

Nucleotide

• Length: 1350 bp

>NTDB_id=618696 HQG80_RS25000 WP_000879431.1 4864188..4865537(-) (comFA) [Bacillus cereus strain HD2.4]
ATGCTAGCGGGGAAACAGTTGCTATTAGAAGAACTTTCTTCAGATTTACAGAGGGAATTAAACGATTTGAAAAAGAAGGG
AGAGATCGTATGTGTACAAGGTGTAAAAAAGAAGAATTCTAAATATATGTGCCAACGCTGTGGAAACGTAGATCGGTGGC
TATTTGCGTCGTTTTTATGTAAAAGGTGCAGTAAAGTGTGCACATATTGCCGGAAGTGTATAGCGATGGGGAGAGTAAGT
GAATGTGCTGTACTTGTTCGCGGGATTGCTGAAAGAAAGAGAGAAAAGAATTCAAATTTGTTACAGTGGAACGGGACGTT
GTCTACTGGCCAGAATTTGGCGGCGCAAGGAGTTATAGAGGCTATTAAGCAAAAAGAATCATTTTTTATTTGGGCTGTAT
GCGGGGCTGGGAAAACAGAGATGTTGTTTTACGGTATTAACGAAGCGCTTCAAAAAGGAGAAAGAGTTTGTATCGCAACG
CCAAGAACGGATGTTGTTTTAGAATTAGCACCGAGATTACAAGAAGTATTTCCATATATAAAGGTAGCGGCTTTATATGG
AGGGAGTGTAGATAAAGAAAAAGATGCAGTACTAGTCGTTGCGACCACGCATCAATTATTACGTTATTATAGGGCCTTTC
ATGTCATAGTTGTAGATGAGATAGATGCTTTTCCATATTGTGCAGATCAAATGTTACAGTACGCGGTAAAACAAGCGATG
AAAGAAAAAGCGGCGCGTATTTATTTAACTGCGACTCCAGATGAAACGTGGAAGCGAAAACTTAAACAAGGTAAACAAAA
AGGTGTTATTGTTTCTGGACGATATCACCGTCATCCGTTGCCAGTTCCTCTATTTTGCTGGTGCGGAAATTGGAAGAAAA
GCCTCAACCGTGAAAGAATTCCTCGAGTTTTACTACAATGGTTAAAGATGTACTTAAACAAAAAGTATCCTGTTTTTTTA
TTCGTTCCCCATGTACGATATATAGAAGAAATAAGCTCGTTATTGAAATCATTGCATAATAAAGTTGAAGGGGTACATGC
AGAAGATCCGATGAGAAAAGAGAAAGTCGCAGCGTTCAGAAAGGGAGAAATCCCATTATTAGTTACAACGACAATTTTAG
AGCGAGGCGTAACGGTGAAAAATTTGCAAGTTGCAGTTTTAGGGGCGGAAGAAGAAATATTTTCAGAAAGTGCGCTCGTA
CAAATTGCGGGCCGAGCAGGGCGGAGCTTTGAAGCACCATATGGAGAGGTCATTTATTTTCACTATGGCAAGACAGAGGC
GATGGTGCGCGCGAAAAAACATATTCAAGGTATGAATAAAAATGCGAAAGAACAAGGATTGATCGATTAA

Domains

Predicted by InterproScan.

• Helicase conserved C-terminal domain (Helicase_C) (313-408)

• Type III restriction enzyme, res subunit (ResIII) (107-254)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comFA	Bacillus subtilis subsp. subtilis str. 168	51.584	98.441	0.508