Detailed information    

insolico Bioinformatically predicted

Overview

Name   spo0J   Type   Regulator
Locus tag   SCR2_RS09725 Genome accession   NC_022245
Coordinates   1934891..1935658 (+) Length   255 a.a.
NCBI ID   WP_003071657.1    Uniprot ID   U2YCD6
Organism   Streptococcus constellatus subsp. pharyngis C818     
Function   require for competence development (predicted from homology)   
Competence regulation

Genomic Context

Location: 1929891..1940658
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  SCR2_RS09695 (SCR2_1893) comE 1930451..1931200 (-) 750 WP_003071650.1 competence system response regulator transcription factor ComE Regulator
  SCR2_RS09700 (SCR2_1894) comD/comD1 1931200..1932513 (-) 1314 WP_020998131.1 GHKL domain-containing protein Regulator
  SCR2_RS10190 (SCR2_1895) - 1932533..1932679 (-) 147 WP_006268843.1 ComC/BlpC family leader-containing pheromone/bacteriocin -
  SCR2_RS09715 (SCR2_1897) rlmH 1932962..1933441 (-) 480 WP_006268880.1 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH -
  SCR2_RS09720 (SCR2_1898) htrA 1933646..1934836 (+) 1191 WP_006270334.1 S1C family serine protease Regulator
  SCR2_RS09725 (SCR2_1899) spo0J 1934891..1935658 (+) 768 WP_003071657.1 ParB/RepB/Spo0J family partition protein Regulator

Sequence

Protein


Download         Length: 255 a.a.        Molecular weight: 29713.19 Da        Isoelectric Point: 9.5149

>NTDB_id=61860 SCR2_RS09725 WP_003071657.1 1934891..1935658(+) (spo0J) [Streptococcus constellatus subsp. pharyngis C818]
MEKYQYITLNDIQTNPYQPRKEFSEEKIAELANSIKEHGIIQPIIVRKSPIIGYELLAGERRFRAAKLAGLTNIPAIIKE
VTDDEMMKQAIIENLQREDLNPIEEAQSYQYLIDKGLTHKEIAQTMGKSRPYITNSVRLLNLPLNIMEAIKEGRISQGHA
RLLINLSEKEQNQWFTKILSQELSVRQLEKQLHPHQKKTSAKNKYQLFLKEEENRLKKIFGTEISLQFSKQSQSGKICIH
FSSQEEYQRIIDSFK

Nucleotide


Download         Length: 768 bp        

>NTDB_id=61860 SCR2_RS09725 WP_003071657.1 1934891..1935658(+) (spo0J) [Streptococcus constellatus subsp. pharyngis C818]
ATGGAAAAATATCAATATATTACACTCAATGACATCCAAACAAATCCTTATCAACCAAGAAAAGAATTTTCAGAAGAAAA
AATTGCTGAACTTGCTAATTCTATAAAAGAACATGGGATTATTCAGCCCATCATTGTACGAAAATCTCCAATAATTGGTT
ATGAATTATTAGCTGGTGAAAGGCGTTTTAGAGCTGCTAAATTAGCAGGCTTAACTAATATACCAGCTATTATAAAAGAA
GTAACAGATGATGAAATGATGAAGCAAGCCATTATTGAAAATTTACAACGAGAAGACTTAAATCCTATAGAAGAAGCACA
ATCTTATCAATATTTAATTGACAAAGGGTTGACACACAAAGAAATCGCTCAAACAATGGGAAAATCACGTCCTTATATTA
CAAATTCTGTCCGTTTATTAAACTTACCTCTTAATATTATGGAAGCGATAAAAGAAGGAAGAATTTCTCAAGGACATGCT
CGTTTACTTATCAACTTATCAGAAAAAGAGCAAAATCAGTGGTTCACTAAAATCCTATCTCAAGAACTTTCAGTTCGACA
GCTAGAAAAACAATTGCATCCACATCAAAAAAAGACTTCAGCAAAAAACAAGTACCAACTTTTTCTCAAAGAAGAAGAAA
ACAGATTAAAAAAGATATTCGGTACAGAAATCTCACTCCAATTTTCTAAGCAATCGCAATCTGGAAAAATCTGTATTCAC
TTTTCAAGTCAAGAAGAATATCAAAGAATTATTGATAGCTTTAAATAA

Domains

Predicted by InterproScan.

HTH domain found in ParB protein (HTH_ParB)

(146-190)

ParB/Sulfiredoxin domain (ParB_N)

(6-94)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB U2YCD6

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  spo0J Streptococcus mutans UA159

53.725

100

0.537

Multiple sequence alignment