Detailed information NTG0618474

Bioinformatically predicted

Overview

• Name: comFA
• Type: Machinery gene
• Locus tag: FHQ13_RS12720
• Genome accession: NZ_CP085501
• Coordinates: 2454650..2455999 (-)
• Length: 449 a.a.
• NCBI ID: WP_086385577.1
• Uniprot ID: -
• Organism: Bacillus cereus strain A24
• Function: ssDNA transport into the cell (predicted from homology) DNA binding and uptake

Genomic Context

Location: 2449650..2460999

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
FHQ13_RS12700 (FHQ13_012700)	secA	2449975..2452482 (-)	2508	WP_000579387.1	preprotein translocase subunit SecA	-
FHQ13_RS12705 (FHQ13_012705)	raiA	2452757..2453299 (-)	543	WP_000671185.1	ribosome-associated translation inhibitor RaiA	-
FHQ13_RS12710 (FHQ13_012710)	cspC	2453622..2453819 (-)	198	WP_001990088.1	cold shock protein CspC	-
FHQ13_RS12715 (FHQ13_012715)	-	2453946..2454650 (-)	705	WP_033666421.1	ComF family protein	-
FHQ13_RS12720 (FHQ13_012720)	comFA	2454650..2455999 (-)	1350	WP_086385577.1	ATP-dependent helicase ComFA	Machinery gene
FHQ13_RS12725 (FHQ13_012725)	-	2456127..2457539 (-)	1413	WP_139848916.1	C40 family peptidase	-
FHQ13_RS12730 (FHQ13_012730)	-	2457688..2458002 (-)	315	WP_000400857.1	helix-turn-helix domain-containing protein	-
FHQ13_RS12735 (FHQ13_012735)	-	2458175..2459017 (-)	843	WP_000684725.1	DegV family protein	-
FHQ13_RS12740 (FHQ13_012740)	-	2459254..2459889 (+)	636	WP_000926672.1	YigZ family protein	-

Sequence

Protein

• Length: 449 a.a.
• Molecular weight: 51088.98 Da
• Isoelectric Point: 10.0895

>NTDB_id=618474 FHQ13_RS12720 WP_086385577.1 2454650..2455999(-) (comFA) [Bacillus cereus strain A24]
MVAGKQLLLEELSSDLQRKLNDLKKKGEIVCVQGVKKKNSKYMCQRCGNVDRRLFASFLCKRCSKVCTYCRKCITMGRVS
ECAVLVRGIAERKREKNSNLLQWNGTLSTGQNLAAQGVIEAIKQKESFFIWAVCGAGKTEMLFYGINEALQKGERVCIAT
PRTDVVLELAPRLQEVFPYIKVAALYGGSVDKEKDAVLVVATTHQLLRYYRAFHVIVVDEIDAFPYCADQMLQYAVKQAM
KEKAARIYLTATPDETWKRKFRKGEQKGVIVSGRYHRHPLPVPLFCWCGNWKKSLNRERIPRVLLQWLKMHLNKKYPVFL
FVPHVRYIEEISSLLKSLHNKVEGVHAEDPMRKEKVAAFRKGEIPLLVTTTILERGVTVKNLQVAVLGAEEEIFSESALV
QIAGRAGRSFEAPYGEVIYFHYGKTKAMVRAKKHIQGMNKNAKEQGLID

Nucleotide

• Length: 1350 bp

>NTDB_id=618474 FHQ13_RS12720 WP_086385577.1 2454650..2455999(-) (comFA) [Bacillus cereus strain A24]
ATGGTAGCGGGGAAACAGTTGCTATTAGAAGAACTTTCTTCAGATTTACAGAGGAAATTAAACGATTTGAAAAAGAAGGG
AGAGATTGTATGTGTACAAGGTGTAAAAAAGAAGAATTCTAAATATATGTGCCAACGCTGTGGAAATGTAGATCGGCGGC
TATTTGCGTCGTTTTTATGTAAAAGGTGCAGTAAAGTGTGCACATATTGCCGGAAGTGTATAACGATGGGGAGAGTAAGT
GAATGTGCTGTACTTGTTCGCGGGATTGCTGAAAGAAAGAGAGAAAAGAATTCAAATTTGTTACAGTGGAACGGGACGTT
GTCTACTGGCCAGAATTTGGCGGCGCAAGGAGTTATAGAGGCTATTAAGCAAAAAGAATCATTTTTTATTTGGGCTGTAT
GCGGGGCTGGGAAAACAGAGATGTTGTTTTACGGTATTAACGAAGCGCTTCAAAAAGGAGAAAGAGTTTGTATCGCAACG
CCAAGAACGGATGTTGTTTTGGAATTAGCACCGAGATTACAAGAAGTATTTCCATATATAAAGGTAGCGGCTTTATATGG
AGGGAGTGTAGATAAAGAAAAAGATGCAGTATTAGTCGTTGCGACCACGCATCAATTATTACGTTATTATAGGGCATTTC
ATGTCATAGTTGTAGATGAGATAGATGCTTTTCCATATTGTGCAGATCAAATGTTACAGTACGCGGTAAAACAAGCGATG
AAAGAAAAAGCGGCGCGTATTTATTTAACTGCGACTCCAGATGAAACGTGGAAGCGAAAATTTAGAAAAGGTGAACAAAA
AGGTGTTATTGTTTCTGGACGATATCACCGTCATCCGTTGCCAGTTCCTCTATTTTGCTGGTGCGGAAATTGGAAGAAAA
GCCTCAACCGTGAAAGAATTCCTCGAGTTTTACTACAATGGTTAAAGATGCACTTAAACAAAAAGTATCCTGTTTTTTTA
TTCGTTCCCCATGTACGATATATAGAAGAAATAAGCTCGTTATTGAAATCATTGCATAATAAAGTTGAAGGGGTACATGC
AGAAGATCCGATGAGAAAAGAGAAAGTCGCAGCGTTCAGAAAGGGAGAAATCCCATTATTAGTTACAACGACAATTTTAG
AGCGAGGCGTAACGGTGAAAAATTTGCAAGTTGCAGTTTTAGGGGCGGAAGAAGAAATATTTTCAGAAAGTGCGCTCGTA
CAAATTGCGGGCCGAGCAGGGCGGAGCTTTGAAGCACCGTATGGAGAGGTCATTTATTTTCACTATGGCAAGACAAAGGC
GATGGTGCGCGCGAAAAAACATATTCAAGGTATGAATAAAAATGCGAAAGAACAAGGATTGATCGATTAA

Domains

Predicted by InterproScan.

• Helicase conserved C-terminal domain (Helicase_C) (312-408)

• Type III restriction enzyme, res subunit (ResIII) (107-254)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comFA	Bacillus subtilis subsp. subtilis str. 168	53.11	93.096	0.494