Detailed information    

insolico Bioinformatically predicted

Overview

Name   ceuB   Type   Machinery gene
Locus tag   IUJ58_RS22460 Genome accession   NZ_CP085485
Coordinates   4340614..4341564 (+) Length   316 a.a.
NCBI ID   WP_216144752.1    Uniprot ID   -
Organism   Priestia aryabhattai strain KNUC0118     
Function   DNA uptake (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 4335614..4346564
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  IUJ58_RS22435 (IUJ58_22370) - 4336627..4337658 (+) 1032 WP_274447757.1 zinc-binding dehydrogenase -
  IUJ58_RS22440 (IUJ58_22375) - 4337701..4338045 (+) 345 WP_216144750.1 bh protein -
  IUJ58_RS22445 (IUJ58_22380) - 4338363..4338527 (+) 165 WP_013057894.1 hypothetical protein -
  IUJ58_RS22450 (IUJ58_22385) - 4338609..4338863 (-) 255 WP_013057893.1 hypothetical protein -
  IUJ58_RS22455 (IUJ58_22390) - 4339226..4340032 (+) 807 WP_216144751.1 cell wall hydrolase -
  IUJ58_RS22460 (IUJ58_22395) ceuB 4340614..4341564 (+) 951 WP_216144752.1 ABC transporter permease Machinery gene
  IUJ58_RS22465 (IUJ58_22400) - 4341557..4342504 (+) 948 WP_216144753.1 iron chelate uptake ABC transporter family permease subunit -
  IUJ58_RS22470 (IUJ58_22405) - 4342498..4343256 (+) 759 WP_216144754.1 ABC transporter ATP-binding protein -
  IUJ58_RS22475 (IUJ58_22410) - 4343280..4344233 (+) 954 WP_274447759.1 siderophore ABC transporter substrate-binding protein -
  IUJ58_RS22480 (IUJ58_22415) - 4344665..4345507 (+) 843 WP_216144756.1 manganese catalase family protein -

Sequence

Protein


Download         Length: 316 a.a.        Molecular weight: 35063.40 Da        Isoelectric Point: 9.9188

>NTDB_id=618378 IUJ58_RS22460 WP_216144752.1 4340614..4341564(+) (ceuB) [Priestia aryabhattai strain KNUC0118]
MKFYQLILVFAVLAVLSLFIGVQDLSAMDLFHLTKEESQTLFFSRFPRLLSIIMAGMSLSICGLIMQQITRNKFVSPTTA
GTMDWARLGVLISLLVFASASPLLKMSIAFIFSLAGNLLFMRILDRIKFNDTIYIPLVGLMLGSIVSSLATFIAYKYDLI
QNLSSWLQGDFSLVVKGRYELLYLSIPLLIIAYLYADKFTVAGMGESFSINLGVKYKQIVNIGLVIVSLITSITILTVGM
LPFLGLIIPNIVSIYRGDHLRKSLPHTALLGAVFVLACDILGRVIIFPYEISIGLMVGVIGSAIFLFMLIRRVRYA

Nucleotide


Download         Length: 951 bp        

>NTDB_id=618378 IUJ58_RS22460 WP_216144752.1 4340614..4341564(+) (ceuB) [Priestia aryabhattai strain KNUC0118]
TTGAAGTTTTATCAGTTAATTCTTGTGTTTGCTGTACTAGCGGTTTTGTCTCTTTTTATAGGAGTACAAGATCTGTCAGC
GATGGATCTGTTTCATTTAACCAAAGAAGAAAGCCAAACGCTGTTTTTTAGTCGTTTTCCTAGGCTCTTGAGTATTATTA
TGGCGGGAATGAGCCTTAGTATTTGCGGATTAATTATGCAGCAAATTACGCGAAATAAGTTTGTATCTCCAACAACCGCA
GGAACGATGGACTGGGCAAGACTTGGTGTGTTGATTTCTCTACTAGTATTTGCTTCAGCAAGTCCTCTATTAAAAATGAG
CATTGCTTTCATTTTCTCACTCGCGGGCAATCTATTGTTTATGAGAATACTAGACAGAATTAAATTTAACGATACGATTT
ATATTCCACTAGTCGGTTTAATGCTCGGCAGTATCGTAAGTTCCTTGGCTACCTTCATCGCCTACAAATACGATTTGATT
CAAAACCTTTCTTCATGGCTGCAAGGAGACTTTTCGCTAGTAGTCAAAGGGAGATATGAACTTTTATACCTGAGTATACC
GCTCTTAATAATTGCTTATCTTTACGCAGATAAGTTTACGGTTGCTGGTATGGGAGAAAGCTTTTCAATCAATTTAGGCG
TGAAATACAAACAAATCGTAAACATTGGATTAGTCATTGTTTCGCTTATTACGTCGATTACGATTTTGACCGTCGGCATG
CTGCCTTTTTTAGGGTTGATTATCCCAAATATCGTATCGATTTACCGTGGAGATCATTTGCGAAAAAGCCTGCCTCATAC
AGCCCTGCTTGGAGCTGTGTTTGTACTTGCGTGCGATATTTTAGGCAGAGTCATTATTTTCCCTTATGAAATCTCTATTG
GGTTAATGGTGGGTGTAATAGGAAGTGCGATCTTTCTTTTTATGCTGATAAGGAGAGTTCGTTATGCATAA

Domains

Predicted by InterproScan.

FecCD transport family (FecCD)

(10-311)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  ceuB Campylobacter jejuni subsp. jejuni 81-176

52.475

95.886

0.503