Detailed information    

insolico Bioinformatically predicted

Overview

Name   comZ   Type   Regulator
Locus tag   IUJ58_RS08360 Genome accession   NZ_CP085485
Coordinates   1704812..1705006 (-) Length   64 a.a.
NCBI ID   WP_013081746.1    Uniprot ID   A0A8D3X5H5
Organism   Priestia aryabhattai strain KNUC0118     
Function   repression of comG operon (predicted from homology)   
Competence regulation

Genomic Context

Location: 1699812..1710006
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  IUJ58_RS08335 (IUJ58_08305) - 1699979..1701001 (-) 1023 WP_216142946.1 ABC transporter ATP-binding protein -
  IUJ58_RS08340 (IUJ58_08310) - 1701228..1702001 (-) 774 WP_216142947.1 DUF2268 domain-containing protein -
  IUJ58_RS08345 (IUJ58_08315) fabF 1702107..1703348 (-) 1242 WP_028412374.1 beta-ketoacyl-ACP synthase II -
  IUJ58_RS08350 (IUJ58_08320) - 1703388..1704326 (-) 939 WP_013081747.1 beta-ketoacyl-ACP synthase III -
  IUJ58_RS08355 (IUJ58_08325) - 1704583..1704783 (+) 201 WP_045291919.1 hypothetical protein -
  IUJ58_RS08360 (IUJ58_08330) comZ 1704812..1705006 (-) 195 WP_013081746.1 ComZ family protein Regulator
  IUJ58_RS08365 (IUJ58_08335) - 1705084..1705968 (-) 885 WP_216142948.1 NAD-dependent epimerase/dehydratase family protein -
  IUJ58_RS08370 (IUJ58_08340) - 1706150..1706890 (-) 741 WP_013055401.1 hypothetical protein -
  IUJ58_RS08375 (IUJ58_08345) - 1707100..1707288 (+) 189 WP_216142949.1 YjzD family protein -
  IUJ58_RS08380 (IUJ58_08350) - 1707491..1708375 (+) 885 WP_274448462.1 NAD(P)-dependent oxidoreductase -
  IUJ58_RS08385 (IUJ58_08355) galT 1708418..1709941 (-) 1524 WP_216142951.1 UDP-glucose--hexose-1-phosphate uridylyltransferase -

Sequence

Protein


Download         Length: 64 a.a.        Molecular weight: 7357.39 Da        Isoelectric Point: 3.9484

>NTDB_id=618337 IUJ58_RS08360 WP_013081746.1 1704812..1705006(-) (comZ) [Priestia aryabhattai strain KNUC0118]
MEEQNMQFMQIAMKYLPEAKQILDETGVELSMEHVQPVLTLLTKVMNDAYELGKQDALAENENN

Nucleotide


Download         Length: 195 bp        

>NTDB_id=618337 IUJ58_RS08360 WP_013081746.1 1704812..1705006(-) (comZ) [Priestia aryabhattai strain KNUC0118]
ATGGAAGAGCAAAATATGCAATTCATGCAAATTGCAATGAAGTACTTGCCAGAAGCAAAGCAGATCTTAGATGAAACAGG
CGTTGAGCTATCAATGGAACACGTACAGCCGGTATTGACATTACTGACAAAAGTAATGAACGACGCCTATGAGCTTGGCA
AGCAAGATGCATTAGCTGAAAATGAAAACAACTAA

Domains

Predicted by InterproScan.

ComZ (ComZ)

(3-57)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comZ Bacillus subtilis subsp. subtilis str. 168

60

93.75

0.563