Detailed information NTG0618158

Bioinformatically predicted

Overview

• Name: pilA
• Type: Machinery gene
• Locus tag: NVS73_RS08725
• Genome accession: NZ_CP102769
• Coordinates: 1669737..1670726 (+)
• Length: 329 a.a.
• NCBI ID: WP_003232026.1
• Uniprot ID: P51835
• Organism: Bacillus subtilis strain YZSR384
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 1664737..1675726

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
NVS73_RS08710 (NVS73_08715)	acpP	1664934..1665167 (+)	234	WP_003154310.1	acyl carrier protein	-
NVS73_RS08715 (NVS73_08720)	rncS	1665307..1666056 (+)	750	WP_003232030.1	ribonuclease III	-
NVS73_RS08720 (NVS73_08725)	smc	1666157..1669717 (+)	3561	WP_003232028.1	chromosome segregation protein SMC	-
NVS73_RS08725 (NVS73_08730)	pilA	1669737..1670726 (+)	990	WP_003232026.1	signal recognition particle-docking protein FtsY	Machinery gene
NVS73_RS08730 (NVS73_08735)	ylqB	1670763..1671248 (-)	486	WP_003245834.1	Ig-like domain-containing protein	-
NVS73_RS08735 (NVS73_08740)	ylxM	1671425..1671757 (+)	333	WP_003238590.1	putative DNA-binding protein	-
NVS73_RS08740 (NVS73_08745)	ffh	1671771..1673111 (+)	1341	WP_003232020.1	signal recognition particle protein	-
NVS73_RS08745 (NVS73_08750)	rpsP	1673217..1673489 (+)	273	WP_003220815.1	30S ribosomal protein S16	-
NVS73_RS08750 (NVS73_08755)	ylqC	1673489..1673734 (+)	246	WP_003232017.1	KH domain-containing protein	-
NVS73_RS08755 (NVS73_08760)	ylqD	1673856..1674242 (+)	387	WP_003232015.1	YlqD family protein	-
NVS73_RS08760 (NVS73_08765)	rimM	1674247..1674771 (+)	525	WP_003232013.1	ribosome maturation factor RimM	-
NVS73_RS08765 (NVS73_08770)	trmD	1674768..1675499 (+)	732	WP_003232011.1	tRNA (guanosine(37)-N1)-methyltransferase TrmD	-

Sequence

Protein

• Length: 329 a.a.
• Molecular weight: 36342.52 Da
• Isoelectric Point: 5.0164

>NTDB_id=618158 NVS73_RS08725 WP_003232026.1 1669737..1670726(+) (pilA) [Bacillus subtilis strain YZSR384]
MSFFKKLKEKITKQTDSVSEKFKDGLEKTRNSFQNKVNDLVSRYRKVDEDFFEELEEVLISADVGFTTVMELIDELKKEV
KRRNIQDPKEVQSVISEKLVEIYNSGDEQISELNIQDGRLNVILLVGVNGVGKTTTIGKLAHKMKQEGKSVVLAAGDTFR
AGAIEQLEVWGERTGVPVIKQTAGSDPAAVIYDAVHAAKARNADVLICDTAGRLQNKVNLMKELEKVKRVIEREVPEAPH
EVLLALDATTGQNAMAQAKEFSKATNVTGIALTKLDGTAKGGIVLAIRNELHIPVKLVGLGEKVDDLQEFDPESYVYGLF
SDLVEKADD

Nucleotide

• Length: 990 bp

>NTDB_id=618158 NVS73_RS08725 WP_003232026.1 1669737..1670726(+) (pilA) [Bacillus subtilis strain YZSR384]
ATGAGCTTTTTTAAAAAATTAAAAGAGAAAATCACAAAACAGACAGATTCCGTATCTGAAAAGTTTAAGGATGGCCTTGA
AAAAACAAGAAACTCCTTTCAAAACAAAGTGAATGATCTTGTATCCCGTTACCGTAAAGTGGATGAGGATTTCTTCGAAG
AGCTTGAAGAGGTTCTTATCAGCGCGGATGTCGGTTTTACAACCGTTATGGAATTAATAGATGAGCTGAAAAAAGAAGTC
AAACGCAGAAATATTCAAGATCCAAAGGAAGTCCAGTCAGTGATTTCTGAGAAACTGGTCGAGATTTATAACAGCGGAGA
TGAGCAAATTTCAGAACTGAACATCCAGGATGGGCGTTTAAACGTAATCCTTCTGGTAGGTGTAAACGGCGTCGGGAAAA
CAACAACGATCGGAAAGCTTGCTCATAAAATGAAACAAGAAGGAAAATCTGTTGTACTTGCCGCCGGAGACACTTTTAGA
GCGGGAGCCATTGAACAGCTGGAAGTATGGGGAGAGCGTACAGGAGTGCCTGTCATTAAGCAGACGGCAGGAAGCGATCC
GGCGGCTGTCATCTACGATGCTGTTCATGCTGCGAAAGCAAGAAATGCCGATGTATTAATTTGTGATACGGCAGGGCGTC
TCCAAAACAAAGTAAATCTCATGAAAGAGCTTGAAAAAGTAAAACGTGTTATCGAAAGAGAAGTTCCTGAAGCTCCGCAT
GAGGTGCTGCTTGCCCTTGATGCCACGACCGGCCAAAATGCAATGGCTCAGGCAAAAGAATTCTCTAAAGCAACAAATGT
TACCGGCATTGCTTTAACGAAGCTTGACGGTACGGCAAAAGGCGGTATCGTCCTTGCGATTCGCAACGAGCTTCACATCC
CGGTTAAACTAGTCGGTTTAGGAGAAAAAGTTGATGACCTTCAGGAATTTGATCCAGAATCCTATGTGTACGGACTCTTT
TCAGATTTAGTGGAAAAAGCCGACGATTAA

Domains

Predicted by InterProScan.

• SRP54-type protein, GTPase domain (SRP54) (121-320)

• SRP54-type protein, helical bundle domain (SRP54_N) (34-99)

3D structure

• AlphaFold DB: P51835

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilA	Neisseria gonorrhoeae MS11	43.709	91.793	0.401