Detailed information    

insolico Bioinformatically predicted

Overview

Name   comZ   Type   Regulator
Locus tag   LIS78_RS03560 Genome accession   NZ_CP085442
Coordinates   671291..671485 (+) Length   64 a.a.
NCBI ID   WP_013081746.1    Uniprot ID   A0A8D3X5H5
Organism   Priestia megaterium strain KF18     
Function   repression of comG operon (predicted from homology)   
Competence regulation

Genomic Context

Location: 666291..676485
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  LIS78_RS03535 (LIS78_03535) galT 666354..667877 (+) 1524 WP_195781199.1 UDP-glucose--hexose-1-phosphate uridylyltransferase -
  LIS78_RS03540 (LIS78_03540) - 667920..668804 (-) 885 WP_195781198.1 NAD(P)-dependent oxidoreductase -
  LIS78_RS03545 (LIS78_03545) - 669008..669196 (-) 189 WP_013055400.1 YjzD family protein -
  LIS78_RS03550 (LIS78_03550) - 669406..670146 (+) 741 WP_013055401.1 hypothetical protein -
  LIS78_RS03555 (LIS78_03555) - 670329..671213 (+) 885 WP_252284652.1 NAD(P)-dependent oxidoreductase -
  LIS78_RS03560 (LIS78_03560) comZ 671291..671485 (+) 195 WP_013081746.1 ComZ family protein Regulator
  LIS78_RS03565 (LIS78_03565) - 671514..671714 (-) 201 WP_045291919.1 hypothetical protein -
  LIS78_RS03570 (LIS78_03570) - 671971..672909 (+) 939 WP_013081747.1 beta-ketoacyl-ACP synthase III -
  LIS78_RS03575 (LIS78_03575) fabF 672949..674190 (+) 1242 WP_013055405.1 beta-ketoacyl-ACP synthase II -
  LIS78_RS03580 (LIS78_03580) - 674297..675070 (+) 774 WP_060746425.1 DUF2268 domain-containing protein -
  LIS78_RS03585 (LIS78_03585) - 675297..676319 (+) 1023 WP_252284653.1 ABC transporter ATP-binding protein -

Sequence

Protein


Download         Length: 64 a.a.        Molecular weight: 7357.39 Da        Isoelectric Point: 3.9484

>NTDB_id=618126 LIS78_RS03560 WP_013081746.1 671291..671485(+) (comZ) [Priestia megaterium strain KF18]
MEEQNMQFMQIAMKYLPEAKQILDETGVELSMEHVQPVLTLLTKVMNDAYELGKQDALAENENN

Nucleotide


Download         Length: 195 bp        

>NTDB_id=618126 LIS78_RS03560 WP_013081746.1 671291..671485(+) (comZ) [Priestia megaterium strain KF18]
ATGGAAGAGCAAAATATGCAATTCATGCAAATTGCAATGAAGTACTTGCCAGAAGCAAAGCAGATCTTAGATGAAACAGG
CGTTGAGCTATCAATGGAACACGTACAGCCGGTATTGACATTACTAACAAAAGTAATGAACGACGCCTATGAGCTTGGCA
AGCAAGATGCATTAGCCGAAAATGAAAACAACTAA

Domains

Predicted by InterproScan.

ComZ (ComZ)

(3-57)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comZ Bacillus subtilis subsp. subtilis str. 168

60

93.75

0.563