Detailed information    

insolico Bioinformatically predicted

Overview

Name   ceuB   Type   Machinery gene
Locus tag   NU955_RS12650 Genome accession   NZ_CP102762
Coordinates   2661029..2661970 (-) Length   313 a.a.
NCBI ID   WP_030423600.1    Uniprot ID   -
Organism   Acinetobacter baumannii strain AOR07-BL     
Function   DNA uptake (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 2656029..2666970
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  NU955_RS12635 bauB 2658340..2659308 (-) 969 WP_005128213.1 siderophore-binding periplasmic lipoprotein BauB -
  NU955_RS12640 bauE 2659315..2660085 (-) 771 WP_005128212.1 ferric acinetobactin ABC transporter ATP-binding protein BauE -
  NU955_RS12645 bauC 2660082..2661029 (-) 948 WP_005128211.1 ferric acinetobactin ABC transporter permease subunit BauC -
  NU955_RS12650 ceuB 2661029..2661970 (-) 942 WP_030423600.1 ferric acinetobactin ABC transporter permease subunit BauD Machinery gene
  NU955_RS12655 - 2661970..2662101 (-) 132 WP_258165705.1 hypothetical protein -
  NU955_RS12660 basB 2662601..2664631 (+) 2031 WP_109850609.1 acinetobactin non-ribosomal peptide synthetase subunit BasB -
  NU955_RS12665 basA 2664702..2666549 (-) 1848 WP_005128206.1 acinetobactin non-ribosomal peptide synthetase subunit BasA -

Sequence

Protein


Download         Length: 313 a.a.        Molecular weight: 33933.99 Da        Isoelectric Point: 8.4665

>NTDB_id=618055 NU955_RS12650 WP_030423600.1 2661029..2661970(-) (ceuB) [Acinetobacter baumannii strain AOR07-BL]
MQFGLFCIFIILCICSLLLGAEPIQWTTLFSFSHESWLTLTASRIPRLITIVLTGIGLAVCGVILQHIVRNKFVEPETSG
GLDAAKLGILVSLTLVPVTSTLSKMIFAIIFCFIASLIYIAIIRRIRFRNTVLVPVIGLMYGSVLSALAEFYAYRFNILQ
SMQGWLLGDFSKIVQGHYEVIYIIFPIVALTYLFAHRFTVIGMGEEMASSLGLSYAAIAAIGLILVAITVSTTVITVGAI
PFVGLVVPNLVALKYGENLAKTLPIVALGGASLLLICDILGRSIIYPFEVPIGLTAGGVGGIIFLILILREFR

Nucleotide


Download         Length: 942 bp        

>NTDB_id=618055 NU955_RS12650 WP_030423600.1 2661029..2661970(-) (ceuB) [Acinetobacter baumannii strain AOR07-BL]
ATGCAATTCGGCTTATTCTGTATTTTTATCATTTTATGTATTTGCTCGTTATTGCTCGGGGCTGAGCCAATACAGTGGAC
TACCTTATTTTCTTTTTCTCATGAGAGTTGGCTCACTCTTACAGCCAGCCGTATTCCTCGTTTAATTACTATTGTGCTTA
CAGGTATCGGGTTGGCGGTATGTGGCGTCATCTTGCAACATATTGTGCGTAACAAGTTTGTTGAACCGGAAACATCGGGC
GGTTTAGATGCTGCCAAACTGGGAATTTTAGTGTCGTTAACTTTAGTTCCGGTAACCAGCACGCTGAGCAAGATGATATT
TGCGATCATTTTTTGTTTTATTGCCAGCTTAATTTATATCGCAATTATTCGGCGGATCCGTTTTAGAAATACGGTTTTAG
TACCAGTTATTGGTTTGATGTACGGCAGTGTACTGAGTGCCTTAGCTGAGTTTTATGCCTATCGCTTTAATATTTTACAA
AGTATGCAAGGGTGGCTTTTAGGAGATTTTTCAAAAATTGTCCAAGGCCACTATGAAGTTATTTACATTATTTTTCCGAT
TGTTGCCCTGACTTATCTTTTCGCACACCGCTTTACCGTAATTGGTATGGGGGAAGAGATGGCTTCTAGTTTGGGACTCA
GTTATGCAGCTATAGCCGCCATTGGTTTGATACTGGTTGCCATTACAGTTTCGACCACAGTAATTACGGTTGGTGCTATT
CCTTTTGTCGGGCTCGTGGTCCCCAATTTAGTCGCACTGAAATACGGAGAAAACTTAGCTAAAACCTTGCCGATTGTGGC
TTTGGGTGGGGCATCTCTATTACTGATTTGTGACATTCTTGGCCGCTCAATCATTTACCCATTTGAAGTGCCGATCGGAC
TTACCGCAGGTGGTGTGGGGGGAATTATTTTCCTCATCCTCATTTTGAGGGAGTTCAGATAA

Domains

Predicted by InterProScan.

FecCD transport family (FecCD)

(9-310)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  ceuB Campylobacter jejuni subsp. jejuni 81-176

44.257

94.569

0.419