Detailed information    

insolico Bioinformatically predicted

Overview

Name   comZ   Type   Regulator
Locus tag   LIT33_RS03630 Genome accession   NZ_CP085415
Coordinates   685337..685531 (+) Length   64 a.a.
NCBI ID   WP_029324748.1    Uniprot ID   A0A2B0NED9
Organism   Priestia megaterium strain CK7     
Function   repression of comG operon (predicted from homology)   
Competence regulation

Genomic Context

Location: 680337..690531
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  LIT33_RS03605 (LIT33_03610) galT 680399..681922 (+) 1524 WP_150368955.1 UDP-glucose--hexose-1-phosphate uridylyltransferase -
  LIT33_RS03610 (LIT33_03615) - 681965..682849 (-) 885 WP_098325913.1 NAD(P)-dependent oxidoreductase -
  LIT33_RS03615 (LIT33_03620) - 683053..683241 (-) 189 WP_013055400.1 YjzD family protein -
  LIT33_RS03620 (LIT33_03625) - 683451..684191 (+) 741 WP_013055401.1 hypothetical protein -
  LIT33_RS03625 (LIT33_03630) - 684374..685258 (+) 885 WP_013055402.1 NAD(P)-dependent oxidoreductase -
  LIT33_RS03630 (LIT33_03635) comZ 685337..685531 (+) 195 WP_029324748.1 ComZ family protein Regulator
  LIT33_RS03635 (LIT33_03640) - 685560..685760 (-) 201 WP_029324750.1 hypothetical protein -
  LIT33_RS03640 (LIT33_03645) - 686017..686955 (+) 939 WP_013055404.1 beta-ketoacyl-ACP synthase III -
  LIT33_RS03645 (LIT33_03650) fabF 686995..688236 (+) 1242 WP_013055405.1 beta-ketoacyl-ACP synthase II -
  LIT33_RS03650 (LIT33_03655) - 688342..689115 (+) 774 WP_013055406.1 DUF2268 domain-containing putative Zn-dependent protease -
  LIT33_RS03655 (LIT33_03660) - 689342..689953 (+) 612 Protein_621 ABC transporter ATP-binding protein -

Sequence

Protein


Download         Length: 64 a.a.        Molecular weight: 7330.37 Da        Isoelectric Point: 3.9484

>NTDB_id=617955 LIT33_RS03630 WP_029324748.1 685337..685531(+) (comZ) [Priestia megaterium strain CK7]
MEEQNMQFMQIAMKYLPEAKQILDETGVELSMEHVQPVLTLLTKVMSDAYELGKQDALAENENN

Nucleotide


Download         Length: 195 bp        

>NTDB_id=617955 LIT33_RS03630 WP_029324748.1 685337..685531(+) (comZ) [Priestia megaterium strain CK7]
ATGGAAGAGCAAAATATGCAATTCATGCAAATTGCAATGAAGTACTTGCCAGAAGCAAAGCAGATCTTAGATGAAACAGG
CGTTGAGTTATCAATGGAACACGTGCAGCCGGTATTGACATTACTAACAAAAGTAATGAGCGACGCCTATGAGCTTGGCA
AGCAAGATGCATTAGCTGAAAATGAAAACAACTAA

Domains

Predicted by InterproScan.

ComZ (ComZ)

(3-57)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A2B0NED9

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comZ Bacillus subtilis subsp. subtilis str. 168

60

93.75

0.563