Detailed information    

insolico Bioinformatically predicted

Overview

Name   kre   Type   Regulator
Locus tag   LIS80_RS19430 Genome accession   NZ_CP085413
Coordinates   3796975..3797433 (+) Length   152 a.a.
NCBI ID   WP_000804868.1    Uniprot ID   A0A0J1HZV6
Organism   Bacillus paranthracis strain KF11     
Function   regulation of regulators (predicted from homology)   
Competence regulation

Genomic Context

Location: 3791975..3802433
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  LIS80_RS19415 (LIS80_19445) - 3792648..3792884 (+) 237 WP_000283743.1 hypothetical protein -
  LIS80_RS19420 (LIS80_19450) - 3793044..3795152 (-) 2109 WP_000423557.1 polyphosphate kinase -
  LIS80_RS19425 (LIS80_19455) ppx 3795261..3796796 (-) 1536 WP_000658868.1 exopolyphosphatase -
  LIS80_RS19430 (LIS80_19460) kre 3796975..3797433 (+) 459 WP_000804868.1 YkyB family protein Regulator
  LIS80_RS19435 (LIS80_19465) - 3797465..3798127 (-) 663 WP_000922491.1 YkyA family protein -
  LIS80_RS19440 (LIS80_19470) - 3798777..3799418 (-) 642 WP_000680835.1 diguanylate cyclase -
  LIS80_RS19445 (LIS80_19475) - 3799583..3799828 (+) 246 Protein_3787 hypothetical protein -
  LIS80_RS19450 (LIS80_19480) - 3799768..3800268 (-) 501 WP_000708168.1 hypothetical protein -
  LIS80_RS19455 (LIS80_19485) - 3800694..3802235 (+) 1542 WP_000445753.1 MDR family MFS transporter -

Sequence

Protein


Download         Length: 152 a.a.        Molecular weight: 17787.52 Da        Isoelectric Point: 10.6793

>NTDB_id=617924 LIS80_RS19430 WP_000804868.1 3796975..3797433(+) (kre) [Bacillus paranthracis strain KF11]
MKPSQPQSQLQNQHSINRLAQSIFVVNRHAKAATNPKYLYWLKKTALERLITEKKAIKEGLHFSRNPRFSQQQSDVLIRL
GDYFFHIPPTKEDFRILPHLGHLESSYRNPKTTLSLTVAKKTLQDYIGPEALKQEKKLSEPVPWYSRTYTKK

Nucleotide


Download         Length: 459 bp        

>NTDB_id=617924 LIS80_RS19430 WP_000804868.1 3796975..3797433(+) (kre) [Bacillus paranthracis strain KF11]
ATGAAACCTTCACAACCACAATCTCAATTACAAAACCAACATTCTATTAATCGACTAGCTCAATCTATTTTCGTTGTGAA
TCGTCATGCTAAAGCTGCAACTAATCCGAAGTATTTATACTGGTTAAAAAAGACAGCTTTAGAACGCTTAATTACTGAAA
AAAAAGCTATTAAAGAAGGATTACATTTCTCTAGAAATCCACGTTTTAGCCAACAACAATCTGATGTTCTTATACGTTTA
GGTGATTACTTTTTCCATATTCCTCCTACAAAAGAAGATTTTCGAATCCTACCACATCTCGGTCATCTTGAATCCTCCTA
TCGAAATCCGAAAACAACCTTATCTTTAACAGTAGCAAAAAAAACACTTCAAGATTATATTGGTCCTGAAGCGCTAAAAC
AAGAAAAGAAATTAAGTGAACCTGTCCCATGGTATAGTCGTACCTATACAAAAAAATAA

Domains

Predicted by InterproScan.

YkyB-like protein (YkyB)

(16-128)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A0J1HZV6

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  kre Bacillus subtilis subsp. subtilis str. 168

64.655

76.316

0.493