Detailed information    

insolico Bioinformatically predicted

Overview

Name   comZ   Type   Regulator
Locus tag   LIT28_RS05770 Genome accession   NZ_CP085409
Coordinates   1126491..1126667 (+) Length   58 a.a.
NCBI ID   WP_009879752.1    Uniprot ID   A0A2A8KX43
Organism   Bacillus thuringiensis strain KF1     
Function   repression of comG operon (predicted from homology)   
Competence regulation

Genomic Context

Location: 1121491..1131667
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  LIT28_RS05750 (LIT28_05750) clpB 1121824..1124424 (+) 2601 WP_242250966.1 ATP-dependent chaperone ClpB -
  LIT28_RS05755 (LIT28_05755) - 1124462..1124644 (-) 183 WP_063224622.1 YjzD family protein -
  LIT28_RS05760 (LIT28_05760) - 1124801..1125535 (+) 735 WP_063224621.1 hydrolase -
  LIT28_RS05765 (LIT28_05765) - 1125565..1126437 (+) 873 WP_242250967.1 NAD(P)-dependent oxidoreductase -
  LIT28_RS05770 (LIT28_05770) comZ 1126491..1126667 (+) 177 WP_009879752.1 ComZ family protein Regulator
  LIT28_RS05775 (LIT28_05775) fabH 1126900..1127832 (+) 933 WP_063224620.1 beta-ketoacyl-ACP synthase III -
  LIT28_RS05780 (LIT28_05780) fabF 1127864..1129102 (+) 1239 WP_000412643.1 beta-ketoacyl-ACP synthase II -
  LIT28_RS05785 (LIT28_05785) - 1129208..1129996 (+) 789 WP_199677684.1 DUF2268 domain-containing putative Zn-dependent protease -
  LIT28_RS05790 (LIT28_05790) - 1130139..1130885 (+) 747 WP_063260232.1 YjbA family protein -

Sequence

Protein


Download         Length: 58 a.a.        Molecular weight: 6576.69 Da        Isoelectric Point: 4.3010

>NTDB_id=617859 LIT28_RS05770 WP_009879752.1 1126491..1126667(+) (comZ) [Bacillus thuringiensis strain KF1]
MNEKSMQFLQIAMKHLPEAKAILDDNGIALDMEKAQPVLELLMKVMNEAYELGKADQE

Nucleotide


Download         Length: 177 bp        

>NTDB_id=617859 LIT28_RS05770 WP_009879752.1 1126491..1126667(+) (comZ) [Bacillus thuringiensis strain KF1]
ATGAATGAGAAAAGCATGCAATTTTTACAAATCGCAATGAAGCATTTACCAGAAGCAAAGGCCATTTTAGATGATAATGG
AATTGCGCTTGATATGGAGAAAGCGCAGCCGGTGTTAGAGTTATTGATGAAAGTTATGAACGAAGCATATGAGCTTGGGA
AAGCAGATCAAGAATAA

Domains

Predicted by InterproScan.

ComZ (ComZ)

(3-57)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comZ Bacillus subtilis subsp. subtilis str. 168

61.818

94.828

0.586