Detailed information    

insolico Bioinformatically predicted

Overview

Name   mecA   Type   Regulator
Locus tag   LIT24_RS06215 Genome accession   NZ_CP085406
Coordinates   1202911..1203594 (+) Length   227 a.a.
NCBI ID   WP_000350708.1    Uniprot ID   A0A9W3KUB1
Organism   Bacillus bombysepticus strain F12     
Function   degradation of ComK (predicted from homology)   
Competence regulation

Genomic Context

Location: 1197911..1208594
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  LIT24_RS06195 (LIT24_06195) - 1198973..1200619 (+) 1647 WP_000727250.1 peptide ABC transporter substrate-binding protein -
  LIT24_RS06200 (LIT24_06200) - 1200649..1200852 (-) 204 WP_000559971.1 hypothetical protein -
  LIT24_RS06205 (LIT24_06205) spx 1201446..1201841 (+) 396 WP_000258267.1 transcriptional regulator Spx -
  LIT24_RS06210 (LIT24_06210) - 1201891..1202565 (-) 675 WP_000362615.1 TerC family protein -
  LIT24_RS06215 (LIT24_06215) mecA 1202911..1203594 (+) 684 WP_000350708.1 adaptor protein MecA Regulator
  LIT24_RS06220 (LIT24_06220) - 1203667..1205211 (+) 1545 WP_000799192.1 cardiolipin synthase -
  LIT24_RS06225 (LIT24_06225) - 1205292..1206536 (+) 1245 WP_000628329.1 competence protein CoiA family protein -
  LIT24_RS06230 (LIT24_06230) pepF 1206588..1208414 (+) 1827 WP_000003348.1 oligoendopeptidase F Regulator

Sequence

Protein


Download         Length: 227 a.a.        Molecular weight: 27023.10 Da        Isoelectric Point: 3.9986

>NTDB_id=617814 LIT24_RS06215 WP_000350708.1 1202911..1203594(+) (mecA) [Bacillus bombysepticus strain F12]
MDIERINDHTMKFFITYIDIEDRGFNREEIWYDRERSEELFWEMMDEARDHDDFFIDGPLWIQVQAVDKGIEVLVTKAEL
SKDGQKLELPIGVDKIIDIPLDEGIESLFQQELIEEVEEQTGTNFNEDGTFGFLIKFNDFEDVISLSHRLIFEDIKDELY
SFENRYYVYVEFDEVLHDEEEIDRILSIILEYGEESTLTIHRVSEYGKQIVKEHALETIRNNFPAKT

Nucleotide


Download         Length: 684 bp        

>NTDB_id=617814 LIT24_RS06215 WP_000350708.1 1202911..1203594(+) (mecA) [Bacillus bombysepticus strain F12]
TTGGATATTGAAAGAATTAATGATCATACGATGAAATTTTTTATTACGTACATTGATATAGAGGATAGAGGATTTAATCG
TGAAGAGATTTGGTATGATCGCGAACGAAGTGAAGAGCTCTTTTGGGAGATGATGGACGAAGCTCGTGATCATGACGATT
TCTTTATTGATGGACCGTTATGGATTCAAGTGCAAGCAGTCGATAAAGGGATTGAAGTACTTGTCACGAAAGCAGAGCTT
TCAAAAGACGGGCAAAAGCTGGAACTACCGATAGGGGTAGACAAAATTATAGATATTCCTCTAGATGAAGGCATCGAATC
ATTATTCCAGCAAGAATTAATCGAAGAGGTAGAAGAACAAACAGGAACAAACTTTAATGAAGATGGTACGTTTGGCTTTT
TAATTAAGTTTAATGATTTTGAAGATGTCATTTCATTAAGTCATCGTCTTATCTTTGAAGATATAAAAGATGAGCTGTAT
TCATTTGAGAACCGCTATTATGTATATGTGGAATTCGATGAAGTGCTACATGATGAAGAAGAAATCGATCGTATTTTAAG
TATTATTTTAGAATATGGGGAAGAATCAACTTTAACAATTCATCGTGTAAGTGAGTATGGAAAACAAATTGTGAAAGAGC
ATGCTCTTGAAACGATTCGCAATAATTTTCCTGCTAAAACGTAG

Domains

Predicted by InterproScan.

Negative regulator of genetic competence (MecA) (MecA)

(1-219)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  mecA Bacillus subtilis subsp. subtilis str. 168

56.14

100

0.564