Detailed information NTG0617791

Bioinformatically predicted

Overview

• Name: comFA
• Type: Machinery gene
• Locus tag: LIS83_RS25885
• Genome accession: NZ_CP085402
• Coordinates: 4989634..4990983 (-)
• Length: 449 a.a.
• NCBI ID: WP_042513388.1
• Uniprot ID: -
• Organism: Bacillus anthracis strain CMF9
• Function: ssDNA transport into the cell (predicted from homology) DNA binding and uptake

Genomic Context

Location: 4984634..4995983

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
LIS83_RS25865 (LIS83_25885)	secA	4984956..4987463 (-)	2508	WP_000579383.1	preprotein translocase subunit SecA	-
LIS83_RS25870 (LIS83_25890)	raiA	4987740..4988282 (-)	543	WP_000671189.1	ribosome-associated translation inhibitor RaiA	-
LIS83_RS25875 (LIS83_25895)	cspC	4988606..4988803 (-)	198	WP_001990088.1	cold shock protein CspC	-
LIS83_RS25880 (LIS83_25900)	comFC	4988930..4989634 (-)	705	WP_041184339.1	comF operon protein ComFC	-
LIS83_RS25885 (LIS83_25905)	comFA	4989634..4990983 (-)	1350	WP_042513388.1	ATP-dependent helicase ComFA	Machinery gene
LIS83_RS25890 (LIS83_25910)	-	4991111..4992421 (-)	1311	WP_042513387.1	C40 family peptidase	-
LIS83_RS25895 (LIS83_25915)	-	4992675..4992989 (-)	315	WP_000400857.1	helix-turn-helix domain-containing protein	-
LIS83_RS25900 (LIS83_25920)	-	4993163..4994005 (-)	843	WP_000844766.1	DegV family protein	-
LIS83_RS25905 (LIS83_25925)	-	4994245..4994880 (+)	636	WP_000926685.1	YigZ family protein	-

Sequence

Protein

• Length: 449 a.a.
• Molecular weight: 51377.10 Da
• Isoelectric Point: 9.7782

>NTDB_id=617791 LIS83_RS25885 WP_042513388.1 4989634..4990983(-) (comFA) [Bacillus anthracis strain CMF9]
MVAGKQLLLEELSSDLRRELSDSKKKGEIICVQGVIKKAFKYICQRCGNIEQRLFASFLCKRCNKVCTYCRKCITMGRVS
ECAVLVRGIHERKGERELHSLQWKGSLSLGQELAAQGVIEAIKQKESFFIWAVCGAGKTEMLFYGIEEALQKGERVCIAT
PRTDVVLELVPRLQEVFPSINVAALYGGSVDREKDAALVVATTHQLLRYYRAFHVMIVDEIDAFPYHADQMLQYAVQQAM
KEKAARIYLTATPDEKWKRNFRRGKQKGIIVSGRYHRHPLPVPLFSWCGNWKKSLHHKKIPRVLLQWLKMYVNKKYPIFL
FVPHVRYIEEMSLLLKGLDHRIDGVHAEDPMRKEKVAAFRKGDIPLLVTTTILERGVTVKNLQVAVLGAEEEIFSESALV
QIAGRAGRSFEEPYGEVFYFHYGKTESMVRAKRHIQSMNKSAKEQGLID

Nucleotide

• Length: 1350 bp

>NTDB_id=617791 LIS83_RS25885 WP_042513388.1 4989634..4990983(-) (comFA) [Bacillus anthracis strain CMF9]
ATGGTTGCTGGAAAGCAGTTACTATTAGAAGAACTCTCTTCAGATTTACGGAGAGAATTAAGTGATTCGAAAAAGAAGGG
AGAGATCATATGTGTACAAGGTGTAATAAAGAAGGCTTTTAAATATATATGTCAGCGCTGCGGGAATATAGAGCAGCGGC
TATTTGCATCATTTTTATGTAAAAGGTGCAATAAAGTATGTACGTATTGCCGCAAGTGTATAACGATGGGGAGAGTTAGT
GAATGTGCTGTACTTGTTCGTGGGATTCACGAAAGAAAAGGAGAAAGGGAATTACATTCGTTACAGTGGAAAGGGAGTTT
GTCTCTTGGTCAGGAGTTGGCGGCGCAAGGTGTTATAGAAGCTATTAAGCAGAAAGAATCTTTTTTTATTTGGGCTGTGT
GCGGGGCCGGAAAAACAGAAATGTTATTTTACGGTATAGAAGAGGCACTTCAAAAAGGAGAAAGAGTTTGTATCGCAACA
CCAAGGACGGACGTTGTACTGGAATTAGTACCGAGATTACAAGAAGTGTTTCCAAGTATAAATGTAGCTGCTTTATACGG
AGGGAGTGTAGATCGTGAAAAAGATGCAGCGTTAGTCGTTGCAACGACTCACCAACTGTTACGTTACTATAGAGCATTTC
ATGTGATGATTGTAGATGAGATTGATGCCTTCCCGTATCATGCGGATCAAATGTTACAGTATGCAGTGCAGCAAGCGATG
AAAGAGAAAGCAGCGCGTATTTATTTAACTGCAACCCCTGATGAAAAGTGGAAGCGCAATTTCAGAAGAGGGAAACAAAA
AGGTATCATTGTCTCTGGACGATACCATCGTCATCCGTTACCAGTTCCTCTATTTAGTTGGTGCGGAAATTGGAAGAAAA
GCCTCCATCATAAAAAAATTCCTCGTGTGTTACTACAATGGTTAAAAATGTACGTAAACAAAAAATACCCTATTTTTTTA
TTTGTTCCTCATGTGCGATATATAGAAGAAATGAGCCTGTTATTGAAAGGGTTGGATCATAGAATCGATGGCGTACATGC
AGAAGATCCGATGAGAAAGGAAAAAGTGGCAGCGTTTAGAAAGGGAGACATTCCGTTATTAGTTACAACGACAATTTTAG
AAAGAGGGGTAACTGTGAAGAACTTACAAGTGGCTGTGTTAGGGGCTGAAGAAGAAATATTTTCAGAAAGTGCGCTCGTA
CAAATTGCAGGCCGAGCAGGTCGTAGTTTTGAAGAACCGTATGGTGAGGTTTTTTATTTTCACTACGGCAAGACAGAGTC
GATGGTACGTGCGAAAAGACATATTCAAAGTATGAACAAAAGTGCGAAAGAACAAGGATTAATTGATTAA

Domains

Predicted by InterproScan.

• Type III restriction enzyme, res subunit (ResIII) (108-254)

• Helicase conserved C-terminal domain (Helicase_C) (312-408)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comFA	Bacillus subtilis subsp. subtilis str. 168	51.843	96.659	0.501
comFA	Latilactobacillus sakei subsp. sakei 23K	40.75	89.087	0.363