Detailed information    

insolico Bioinformatically predicted

Overview


Name   micB   Type   Regulator
Locus tag   SAIN_RS03480 Genome accession   NC_022244
Coordinates   711956..713308 (+) Length   450 a.a.
NCBI ID   WP_021001532.1    Uniprot ID   A0AAP6BQL7
Organism   Streptococcus anginosus C1051     
Function   repress competence development (predicted from homology)   
Competence regulation

Genomic Context


Location: 706956..718308
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  SAIN_RS03455 (SAIN_0675) ccpA 707107..708111 (+) 1005 WP_021001527.1 catabolite control protein A Regulator
  SAIN_RS03460 (SAIN_0676) - 708291..709289 (+) 999 WP_021001528.1 glycosyltransferase family 4 protein -
  SAIN_RS03465 (SAIN_0677) - 709291..710604 (+) 1314 WP_021001529.1 glycosyltransferase family 4 protein -
  SAIN_RS03470 (SAIN_0678) - 710631..710972 (+) 342 WP_021001530.1 hypothetical protein -
  SAIN_RS03475 (SAIN_0679) micA 711262..711963 (+) 702 WP_021001531.1 response regulator YycF Regulator
  SAIN_RS03480 (SAIN_0680) micB 711956..713308 (+) 1353 WP_021001532.1 cell wall metabolism sensor histidine kinase VicK Regulator
  SAIN_RS03485 (SAIN_0681) vicX 713311..714114 (+) 804 WP_021001533.1 MBL fold metallo-hydrolase Regulator
  SAIN_RS03490 - 714123..714483 (+) 361 Protein_658 YbaN family protein -
  SAIN_RS03495 (SAIN_0682) rnc 714865..715563 (+) 699 WP_021001534.1 ribonuclease III -

Sequence


Protein


Download         Length: 450 a.a.        Molecular weight: 51362.59 Da        Isoelectric Point: 4.6876

>NTDB_id=61763 SAIN_RS03480 WP_021001532.1 711956..713308(+) (micB) [Streptococcus anginosus C1051]
MIDNIRQFIVSKDFVFVLLILGFILVITLLSLENRRDNVRIRQLNQKVKDLIAGNYSEILDVQGGPEITDITNSINDLSE
VIRLTHENLEQETKRLSSILSYMTDGVLATNRRGQIIMINDMATKQLGVKESEARKMNILKLLDIEDEYDLRDLITKVPE
LTIDSQDENGEFLSLRVRFALIRRESGFISGLVAVLHDTTEQEKEERERRLFVSNVSHELRTPLTSVKSYLEALDEGALS
EPVAPDFIKVSLDETNRMMRMVSDLLSLSRIDNATSHLDIELTNFTAFITFILNRFDKIRSQNDDKKYEIIRDYPINSIW
VEIDTDKMTQVIDNIINNAIKYSPDGGKITVSMKTTDTQMILSISDEGLGIPKKDLPKIFDRFYRVDKARSRAQGGSGLG
LAIAKEIIKQHNGFIWAKSEYGKGSTFTIVLPYDKEAVKDDDWEEDELEG

Nucleotide


Download         Length: 1353 bp        

>NTDB_id=61763 SAIN_RS03480 WP_021001532.1 711956..713308(+) (micB) [Streptococcus anginosus C1051]
ATGATTGATAATATTAGACAATTTATTGTATCAAAAGACTTTGTATTTGTTTTACTTATTTTAGGGTTCATCTTGGTGAT
TACCTTGCTTTCCTTGGAAAACAGGCGTGACAACGTTCGTATTCGCCAATTGAATCAAAAAGTAAAAGATTTAATTGCAG
GCAATTACTCAGAAATTTTAGATGTACAAGGTGGTCCAGAAATTACGGATATTACCAACAGTATCAATGATTTATCTGAG
GTAATCCGTCTAACGCATGAAAATTTAGAGCAAGAAACTAAGCGCCTGTCGAGTATTTTATCCTATATGACGGACGGCGT
TCTTGCGACCAATCGTCGTGGGCAGATTATCATGATTAATGATATGGCGACCAAGCAGTTGGGGGTCAAAGAATCCGAAG
CACGAAAGATGAATATCTTAAAACTGTTGGATATCGAAGACGAATATGACTTACGAGACTTGATTACGAAAGTTCCAGAA
TTGACCATTGATTCGCAGGATGAAAATGGAGAGTTTTTAAGTTTACGTGTTCGATTTGCCTTGATTCGGCGAGAATCAGG
CTTTATTTCAGGGCTGGTTGCAGTGTTACACGATACAACGGAGCAGGAAAAAGAAGAGCGTGAGCGGAGACTGTTTGTTT
CGAATGTCAGTCACGAATTACGTACTCCCTTGACCAGTGTCAAGTCTTATCTGGAAGCACTAGATGAAGGTGCCTTATCA
GAACCAGTCGCACCGGATTTCATCAAGGTTTCATTAGACGAGACAAATCGGATGATGCGCATGGTTTCGGACTTGCTGAG
TTTGTCACGTATTGACAATGCAACCAGTCATTTGGATATTGAATTGACGAATTTTACAGCTTTTATCACCTTTATTTTGA
ACCGTTTTGATAAAATCAGAAGCCAGAATGATGATAAAAAGTATGAAATTATACGAGATTATCCGATTAACTCTATTTGG
GTCGAAATTGATACAGATAAGATGACACAGGTGATTGATAATATTATCAACAATGCCATTAAATATTCTCCTGACGGTGG
TAAAATTACGGTCAGTATGAAAACGACGGATACCCAAATGATTTTGTCGATTTCAGATGAAGGCTTAGGAATTCCTAAAA
AAGATTTGCCGAAAATTTTTGATAGATTTTATCGTGTAGACAAAGCAAGAAGTCGCGCCCAAGGTGGATCCGGACTGGGC
TTAGCCATTGCCAAAGAGATTATCAAGCAACATAACGGCTTTATCTGGGCAAAGAGCGAGTACGGCAAAGGCTCGACGTT
TACAATCGTTCTGCCATATGACAAAGAAGCTGTCAAAGATGATGATTGGGAAGAAGATGAATTAGAAGGATAG


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  micB Streptococcus pneumoniae Cp1015

80.866

97.556

0.789

  vicK Streptococcus mutans UA159

71.883

90.889

0.653


Multiple sequence alignment