Detailed information    

insolico Bioinformatically predicted

Overview

Name   comZ   Type   Regulator
Locus tag   LHV56_RS06290 Genome accession   NZ_CP085397
Coordinates   1302633..1302815 (+) Length   60 a.a.
NCBI ID   WP_034314525.1    Uniprot ID   A0A223EEA0
Organism   Peribacillus frigoritolerans strain KF3     
Function   repression of comG operon (predicted from homology)   
Competence regulation

Genomic Context

Location: 1297633..1307815
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  LHV56_RS06275 (LHV56_06310) - 1300266..1300457 (-) 192 WP_048686917.1 YjzD family protein -
  LHV56_RS06280 (LHV56_06315) - 1300752..1301474 (+) 723 WP_048686919.1 alpha/beta hydrolase -
  LHV56_RS06285 (LHV56_06320) - 1301577..1302410 (+) 834 WP_053534135.1 hypothetical protein -
  LHV56_RS06290 (LHV56_06325) comZ 1302633..1302815 (+) 183 WP_034314525.1 ComZ family protein Regulator
  LHV56_RS06295 (LHV56_06330) - 1302858..1303079 (-) 222 WP_252297481.1 hypothetical protein -
  LHV56_RS06300 (LHV56_06335) - 1303282..1304217 (+) 936 WP_053534137.1 beta-ketoacyl-ACP synthase III -
  LHV56_RS06305 (LHV56_06340) fabF 1304268..1305506 (+) 1239 WP_053534138.1 beta-ketoacyl-ACP synthase II -
  LHV56_RS06310 (LHV56_06345) - 1305569..1306393 (+) 825 WP_252297482.1 DUF2268 domain-containing putative Zn-dependent protease -
  LHV56_RS06315 (LHV56_06350) - 1306508..1307263 (+) 756 WP_053534140.1 YjbA family protein -

Sequence

Protein


Download         Length: 60 a.a.        Molecular weight: 6845.97 Da        Isoelectric Point: 4.4566

>NTDB_id=617605 LHV56_RS06290 WP_034314525.1 1302633..1302815(+) (comZ) [Peribacillus frigoritolerans strain KF3]
MSSDKTLEFMGIAMKYFPEAKAKLEASGIPFSMEMAEPFMELFKSVMQEAYELGKQDAQR

Nucleotide


Download         Length: 183 bp        

>NTDB_id=617605 LHV56_RS06290 WP_034314525.1 1302633..1302815(+) (comZ) [Peribacillus frigoritolerans strain KF3]
ATGAGTTCAGATAAAACTCTTGAATTTATGGGAATCGCCATGAAATACTTCCCAGAGGCTAAAGCGAAGCTTGAGGCAAG
CGGGATTCCATTTTCAATGGAGATGGCAGAGCCATTCATGGAGCTCTTTAAAAGCGTAATGCAAGAAGCTTATGAGCTTG
GCAAACAAGATGCTCAGCGTTAA

Domains

Predicted by InterproScan.

ComZ (ComZ)

(4-58)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A223EEA0

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comZ Bacillus subtilis subsp. subtilis str. 168

64.407

98.333

0.633