Detailed information    

insolico Bioinformatically predicted

Overview

Name   yaaT   Type   Regulator
Locus tag   GDK21_RS02420 Genome accession   NZ_AP019542
Coordinates   516679..517482 (+) Length   267 a.a.
NCBI ID   WP_152064707.1    Uniprot ID   -
Organism   Staphylococcus aureus strain KG-03     
Function   accelerate the production of Spo0A~P (predicted from homology)   
Competence regulation

Genomic Context

Location: 511679..522482
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  GDK21_RS02400 (SAKG03_04570) - 513225..514562 (+) 1338 WP_000812829.1 aminotransferase class V-fold PLP-dependent enzyme -
  GDK21_RS02405 (SAKG03_04580) tmk 514564..515181 (+) 618 WP_001272126.1 dTMP kinase -
  GDK21_RS02410 (SAKG03_04590) - 515209..515538 (+) 330 WP_000781979.1 cyclic-di-AMP receptor -
  GDK21_RS02415 (SAKG03_04600) - 515752..516678 (+) 927 WP_000344336.1 DNA polymerase III subunit delta' C-terminal domain-containing protein -
  GDK21_RS02420 (SAKG03_04610) yaaT 516679..517482 (+) 804 WP_152064707.1 stage 0 sporulation family protein Regulator
  GDK21_RS02425 (SAKG03_04620) yabA 517478..517846 (+) 369 WP_010922823.1 DNA replication initiation control protein YabA -
  GDK21_RS02430 (SAKG03_04630) - 518120..518845 (+) 726 WP_000910686.1 tRNA1(Val) (adenine(37)-N6)-methyltransferase -
  GDK21_RS02435 (SAKG03_04640) - 518838..519086 (+) 249 WP_000377064.1 GIY-YIG nuclease family protein -
  GDK21_RS02440 (SAKG03_04650) rsmI 519088..519927 (+) 840 WP_000279926.1 16S rRNA (cytidine(1402)-2'-O)-methyltransferase -
  GDK21_RS02445 (SAKG03_04660) metG 520212..522185 (+) 1974 WP_001051129.1 methionine--tRNA ligase -

Sequence

Protein


Download         Length: 267 a.a.        Molecular weight: 30292.99 Da        Isoelectric Point: 4.5801

>NTDB_id=61758 GDK21_RS02420 WP_152064707.1 516679..517482(+) (yaaT) [Staphylococcus aureus strain KG-03]
MPNVIGVQFQKAGKLEYYTPNDIQVDIEDWVVVESKRGIEIGIVKNPLMDIAEEDVVLPLKNIIRIADDKDIDKFNCNER
DAENALILCKDIVREQGLDMRLVNCEYTLDKSKVIFNFTADDRIDFRKLVKILAQHLKTRIELRQIGVRDEAKLLGGIGP
CGRSLCCFTFLGDFEPVSIKMAKDQNLSLNPTKISGACGRLMCCLKYENDYYEEVRAQLPDIGEAIETPDGNGKVVALNI
LDISMQVKLEGHEQPLEYKLEEIETMH

Nucleotide


Download         Length: 804 bp        

>NTDB_id=61758 GDK21_RS02420 WP_152064707.1 516679..517482(+) (yaaT) [Staphylococcus aureus strain KG-03]
ATGCCAAATGTAATAGGTGTTCAGTTTCAAAAAGCGGGAAAATTAGAATATTATACACCTAATGATATACAAGTAGATAT
AGAAGACTGGGTAGTTGTCGAATCTAAAAGAGGCATAGAGATAGGTATTGTTAAAAATCCATTAATGGATATTGCTGAAG
AGGATGTTGTGTTACCTCTTAAAAATATTATTCGCATTGCTGATGACAAAGATATTGATAAATTTAATTGTAATGAACGA
GATGCTGAAAATGCATTAATACTATGTAAAGACATTGTAAGAGAACAAGGTTTGGACATGCGTTTAGTCAATTGCGAATA
TACATTAGATAAATCGAAAGTTATTTTTAATTTTACGGCGGATGATCGTATTGATTTTAGAAAATTAGTAAAAATATTAG
CGCAACATTTAAAAACACGTATCGAGTTGAGACAAATTGGTGTAAGGGATGAAGCCAAATTGCTTGGCGGTATCGGACCT
TGTGGTAGGTCGTTATGTTGTTTTACATTTTTAGGGGATTTTGAACCAGTATCGATTAAGATGGCTAAGGATCAAAATTT
ATCATTAAATCCAACTAAAATTTCTGGTGCATGTGGTCGTTTGATGTGTTGTTTAAAATATGAAAATGACTATTATGAGG
AAGTACGTGCACAATTACCTGATATTGGTGAAGCAATTGAAACGCCTGATGGTAACGGGAAAGTAGTTGCTTTAAATATA
TTAGACATTTCTATGCAGGTGAAGCTTGAGGGACATGAACAGCCACTTGAATATAAATTAGAAGAAATAGAAACTATGCA
TTAA

Domains

Predicted by InterProScan.

PSP1 C-terminal conserved region (PSP1)

(61-146)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  yaaT Bacillus subtilis subsp. subtilis str. 168

61.977

98.502

0.61