Detailed information    

insolico Bioinformatically predicted

Overview

Name   comZ   Type   Regulator
Locus tag   LIT26_RS07040 Genome accession   NZ_CP085395
Coordinates   1436539..1436721 (+) Length   60 a.a.
NCBI ID   WP_034314525.1    Uniprot ID   A0A223EEA0
Organism   Peribacillus frigoritolerans strain CK6     
Function   repression of comG operon (predicted from homology)   
Competence regulation

Genomic Context

Location: 1431539..1441721
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  LIT26_RS07025 (LIT26_07050) - 1434183..1434374 (-) 192 WP_048686917.1 YjzD family protein -
  LIT26_RS07030 (LIT26_07055) - 1434669..1435391 (+) 723 WP_063596462.1 alpha/beta hydrolase -
  LIT26_RS07035 (LIT26_07060) - 1435494..1436327 (+) 834 WP_063596461.1 hypothetical protein -
  LIT26_RS07040 (LIT26_07065) comZ 1436539..1436721 (+) 183 WP_034314525.1 ComZ family protein Regulator
  LIT26_RS07045 (LIT26_07070) - 1436764..1436985 (-) 222 WP_048686923.1 hypothetical protein -
  LIT26_RS07050 (LIT26_07075) - 1437188..1438123 (+) 936 WP_034314519.1 beta-ketoacyl-ACP synthase III -
  LIT26_RS07055 (LIT26_07080) fabF 1438174..1439412 (+) 1239 WP_048686925.1 beta-ketoacyl-ACP synthase II -
  LIT26_RS07060 (LIT26_07085) - 1439539..1440303 (+) 765 WP_048686927.1 DUF2268 domain-containing putative Zn-dependent protease -
  LIT26_RS07065 (LIT26_07090) - 1440418..1441173 (+) 756 WP_034314514.1 YjbA family protein -

Sequence

Protein


Download         Length: 60 a.a.        Molecular weight: 6845.97 Da        Isoelectric Point: 4.4566

>NTDB_id=617551 LIT26_RS07040 WP_034314525.1 1436539..1436721(+) (comZ) [Peribacillus frigoritolerans strain CK6]
MSSDKTLEFMGIAMKYFPEAKAKLEASGIPFSMEMAEPFMELFKSVMQEAYELGKQDAQR

Nucleotide


Download         Length: 183 bp        

>NTDB_id=617551 LIT26_RS07040 WP_034314525.1 1436539..1436721(+) (comZ) [Peribacillus frigoritolerans strain CK6]
ATGAGTTCAGATAAAACTCTTGAATTTATGGGAATCGCCATGAAATACTTCCCAGAGGCTAAAGCGAAGCTTGAGGCAAG
CGGGATTCCATTTTCAATGGAGATGGCAGAGCCATTCATGGAGCTCTTTAAAAGCGTAATGCAAGAAGCTTATGAGCTTG
GCAAACAAGATGCTCAGCGTTAA

Domains

Predicted by InterproScan.

ComZ (ComZ)

(4-58)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A223EEA0

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comZ Bacillus subtilis subsp. subtilis str. 168

64.407

98.333

0.633